Polynucleobacter asymbioticus: Pnuc_2006
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Entry
Pnuc_2006 CDS
T00502
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
pnu
Polynucleobacter asymbioticus
Pathway
pnu00300
Lysine biosynthesis
pnu00470
D-Amino acid metabolism
pnu01100
Metabolic pathways
pnu01110
Biosynthesis of secondary metabolites
pnu01120
Microbial metabolism in diverse environments
pnu01230
Biosynthesis of amino acids
Module
pnu_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pnu00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Pnuc_2006
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Pnuc_2006
Enzymes [BR:
pnu01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
Pnuc_2006
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Ortholog
Paralog
Gene cluster
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Motif
Pfam:
DAP_epimerase
Pro_racemase
Motif
Other DBs
NCBI-ProteinID:
ABP35217
UniProt:
A4T0F3
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All DBs
Position
2078959..2079813
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AA seq
284 aa
AA seq
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MHGAGNDFIVLNGIDQDLSEITREQWQALAHRQFGIGADQILLVEKATRPDADFRYRIFN
ADGGEVEQCGNGSRCFVRFVLDQGLSSKNPLRVEVAHTVLTLKSHPDGQVEVDMGAPIFD
HNLIPFNANGLASMQEFHEMLYALPIDLPATHDSLVGVLSMGNPHAVQVVGDVDSAPVLE
EGSAIERHPAFPNKVNVGYLQVLNRNEIKLRVYERGAGETLACGTGACAGVVSGIRRGLL
DSPVKVHTRGGDLQIVWGGVIDEVAHPVIMTGPATTVFEGETEI
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgcatggtgctggcaatgatttcattgtgctcaatggcatcgatcaagaccttagtgaa
attacacgtgagcaatggcaagccttagcacatcgccaatttgggattggtgcagatcaa
atcttattagttgaaaaagcaactcgccctgatgctgattttcgctatcgtatttttaat
gctgatggcggggaagtagagcaatgtggtaatggctcgcgttgttttgtccgtttcgtc
ttggatcaaggcttgtcatctaaaaatccattacgcgttgaagtagcgcataccgttctc
accctcaaatctcatccagatggtcaggtagaagttgatatgggtgcgccgatttttgat
cacaaccttattccatttaatgcaaatggtttagccagcatgcaagagtttcatgaaatg
ctttatgcacttccaatagatctgccagcaactcatgacagcctggttggcgttctctcc
atgggcaatcctcatgcagtccaggtagttggagatgtagatagcgcgcccgtcttagaa
gaggggtctgcgattgaaagacatccagcgtttcctaacaaggtgaatgtaggctacttg
caagtgctcaatcgcaatgaaatcaagttgcgtgtttatgagcgaggcgcaggagaaacg
ctagcgtgcggcacaggcgcttgtgcaggcgttgtttcaggaatccgcagaggcctatta
gattcgccagtgaaggtgcatacccgtggtggtgatctccagatcgtttggggcggagtt
atagatgaagtggcacatcccgtcatcatgactggtccagccactacagtcttcgaaggc
gaaactgaaatctaa
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