Paenarthrobacter nicotinovorans: JMY29_01440
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Entry
JMY29_01440 CDS
T08055
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
pnv
Paenarthrobacter nicotinovorans
Pathway
pnv03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
pnv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
JMY29_01440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pnv03400
]
JMY29_01440
DNA repair and recombination proteins [BR:
pnv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
JMY29_01440
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
DUF5321
Motif
Other DBs
NCBI-ProteinID:
UKF04292
LinkDB
All DBs
Position
292365..293231
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AA seq
288 aa
AA seq
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MRAIWKGSIAFGLVNVPVKLYSATEDHDIGLHQVHNKDGGRIRYQRKCEICSEVVAYEDI
DKAYEEEGRTVVLTAAELKSLPEENSREIEVVEFIPAEQLDPIMYERSYFLEPDSKSPKA
YMLLRQTLEDTDRIAIVQYALRQKTRLGALRVRGDVLLLQALLWGDEVREAKFPSLETDI
KISDKELEMSSALVESMAHDFDPDEYTDDYQAQLKTLIEAKLEKGEALDTEATFGNVEGE
GEGGDVIDLMEALKRSLDKKRGKEKASDDDAAASKTAGKPKARAKKKA
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgagggctatatggaagggatctatcgcgttcggtctggtcaacgtaccagtgaagctc
tacagtgccacggaggatcacgacattggcctgcaccaagtccacaataaggacggcgga
cgcatcaggtaccagcgtaaatgcgaaatttgcagcgaagtcgtagcttacgaggacatc
gacaaggcctacgaggaagagggccgcaccgtggtcctcaccgccgccgagctgaagtcc
ctgccggaggagaacagccgcgaaatagaggtggtggagttcatccccgccgagcagctg
gacccgatcatgtacgagcgcagctatttcctggagcctgattccaaatcgcccaaggcc
tacatgctgctgcgccagacgctggaggacacggacaggatcgcgatcgtccagtatgcg
ctgcgccagaagacccggttgggggccctgcgcgtgcgtggagatgtgctgctgctgcag
gcgctcctatggggtgacgaagtccgcgaagccaagttcccgtccttggaaacagacatc
aagatttccgacaaggaactggaaatgtcctccgcactggtggaatccatggcccacgac
ttcgacccggatgaatacaccgacgactaccaggcccagttgaagacactcatcgaagcc
aagctcgaaaagggtgaggccctggacacggaggccactttcggcaacgtcgaaggcgaa
ggagaaggcggcgacgtcatcgacctcatggaggccctgaaacgcagcctcgacaagaaa
cgcggcaaggaaaaagcgtccgacgacgacgctgccgccagcaaaactgccggcaagcca
aaggcgcgggcgaagaaaaaggcgtga
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