Pontibacillus sp. HMF3514: GS400_11180
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Entry
GS400_11180 CDS
T06374
Symbol
sigX
Name
(GenBank) RNA polymerase sigma factor SigX
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
pof
Pontibacillus sp. HMF3514
Brite
KEGG Orthology (KO) [BR:
pof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pof03021
]
GS400_11180 (sigX)
Transcription machinery [BR:
pof03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
GS400_11180 (sigX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
Sigma70_ECF
HTH_23
HTH_28
Motif
Other DBs
NCBI-ProteinID:
QHE52559
UniProt:
A0A6P1HHK2
LinkDB
All DBs
Position
complement(2163786..2164328)
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AA seq
180 aa
AA seq
DB search
MKSVFQELYENYHKDVFQFLFYMVKNREQAEDLVQEVYIKVMNSYDRFKGDSSEKTWLFS
IARHVAIDHFRKQKRKRNRVLEFFDWSEKGHLIQDDQPEPEEVALQNEEIQKIYRCLDRC
SLDQKSVIILRYIQSMSIQETADILGMSVSKVKTTQHRGMKTLQKLMQEDQEEGINSEAK
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcggtctttcaagagctctatgagaattaccataaagacgtctttcaattttta
ttttatatggtaaaaaaccgggaacaagctgaggatctcgttcaagaagtatatattaaa
gtaatgaattcttatgatcgctttaaaggtgatagtagtgaaaaaacatggcttttctct
attgcgcgtcatgtagcgattgatcattttaggaagcaaaaacgtaaacgtaaccgtgtg
cttgaattctttgactggagtgagaagggacatcttattcaggatgaccaaccagaacct
gaagaagtagctcttcaaaatgaagaaatccagaaaatttatagatgcttagaccgttgt
tccttagatcaaaagagtgtgattatattgcgatatattcaatccatgtcaatccaagaa
accgctgatatattaggtatgagcgtgagtaaggtgaaaacgacacaacatcgaggaatg
aagacacttcaaaaactcatgcaagaggatcaagaggaggggataaacagtgaagcaaaa
taa
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