Pseudomonas otitidis: PtoMrB4_05520
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Entry
PtoMrB4_05520 CDS
T06890
Name
(GenBank) type VI secretion system-associated protein
KO
K11901
type VI secretion system protein ImpB
Organism
poj
Pseudomonas otitidis
Pathway
poj02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
poj00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
PtoMrB4_05520
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
poj02044
]
PtoMrB4_05520
Secretion system [BR:
poj02044
]
Type VI secretion system
Imp/Vas secretion system core components
PtoMrB4_05520
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T6SS_VipA
Motif
Other DBs
NCBI-ProteinID:
BCA26575
UniProt:
A0A679G8U2
LinkDB
All DBs
Position
complement(584477..584977)
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AA seq
166 aa
AA seq
DB search
MAKEGSVAPKERINITFKPATGNAQEEIELPLKLLVLGDFTQRADDRKVEDRKPIGIDKN
SFDEVLAKQELSLTLNVPNRLQEDKEDDELGISLSVNSMKDFNPANLVEQVPELKKLMEL
RDALVALKGPLGNAPTFRKAIEGVLADEESRTRVLGELGLGTSQDE
NT seq
501 nt
NT seq
+upstream
nt +downstream
nt
atggccaaagaaggctcggtcgcccccaaggaacgcatcaacatcaccttcaagcccgcc
acgggcaacgcccaggaagaaattgagctgcccctcaagctgctcgtgctgggggatttc
acccagcgtgcggacgaccgcaaggtcgaggaccgcaaaccgatcggcatcgacaagaac
agcttcgacgaagtgctcgccaagcaggagctgagcctcacgctgaacgtgccgaaccgc
ctccaggaggacaaggaagacgacgagctgggcatcagcctgtcggtcaactccatgaag
gacttcaaccccgccaacctggtcgagcaggtgcccgagctgaagaagctgatggagctg
cgcgacgccctggtcgccctcaagggcccgctgggtaacgcccccaccttccgcaaggcg
atcgaaggcgtactggccgacgaggagtcccgcacccgcgtactgggtgagctgggcctc
ggtaccagccaggacgagtaa
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