Pseudarthrobacter oxydans: SMD14_02175
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Entry
SMD14_02175 CDS
T09608
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
pok
Pseudarthrobacter oxydans
Pathway
pok03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
pok00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
SMD14_02175
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pok03400
]
SMD14_02175
DNA repair and recombination proteins [BR:
pok03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
SMD14_02175
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
WPU09847
LinkDB
All DBs
Position
482622..483737
Genome browser
AA seq
371 aa
AA seq
DB search
MRAIWKGAIAFGLVNVPVKVYSATEDHDISLHQVHNADGGRIRYQRRCEVCSQVIDYSDI
EKAYEEDGRTVVLSKDELKAIPAENNHEIEVVQFVPSEQLEPMMFEKSYYLEPDSKSPKA
YVLLRSALEDTDRVAIVQFALREKTRLGALRIKDDVLVLQSLLWPDEVREAKFPSLDASV
KISPQERDMSAALVESMAADFDPASFTDDYQVQLRQLIEAKLEQGESLDTEETFGVEAGE
GSKGEVIDLMEALKRSLDRKRGGGSDAAAGRAGGEAGGDSGSEAGEDEAAAKPARKRSTA
AKTSAEKTGTTARSAAAKSTGTQSGADKSGTAKSGTAKSAAAKSTAAKSAEKPAAKASAS
KATGTRARKPA
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgagagccatctggaaaggtgccatcgcgttcggcctggtcaacgtgcccgtgaaggtc
tacagcgccactgaggatcatgacatcagtctgcaccaggtccacaacgccgacggcggc
cggatccgctaccagcggcggtgcgaggtctgcagccaggtcatcgattattcggacatc
gagaaggcctacgaggaggacggccggacggtggtcctgtccaaggacgaactcaaggcc
attccggcggagaacaaccatgagatcgaagtggtgcagttcgtcccgtccgagcagctt
gagcccatgatgttcgagaagagctactaccttgagccggactccaagtctcccaaggcc
tacgtgctgctgcgcagtgcgctggaagacacggacagggtggccattgtccagttcgcg
ctgcgggagaagacccggctgggcgctttgcggatcaaggacgatgtcctggtgctccag
tccctcctgtggccggacgaggtgcgggaagcgaaattcccttcccttgatgcatccgtc
aagatctccccgcaggagcgcgatatgtccgcggccctggtggagtccatggcggccgat
ttcgatcccgcttccttcacggacgactaccaggtccagctccgccagcttattgaggcc
aagctggagcagggtgaatcgctggacaccgaggaaaccttcggcgtggaggccggcgag
ggcagcaagggtgaagtcatcgacctgatggaggcgctgaagcgaagcctggaccggaaa
cggggcggcgggtccgatgccgcggcaggacgggcgggtggcgaagccggcggggactcc
ggcagcgaagccggcgaagacgaagcagccgccaaaccggcgcgcaagcggtctaccgcg
gctaagaccagtgccgaaaagaccggcaccacggcgaggtccgcggcagcaaagtccacg
ggaacgcagtccggcgcagacaaatccggcacggccaagtccggcacggcaaaatccgcc
gccgccaagtcgacagcggccaagtccgccgaaaaacccgccgccaaggcgtccgccagc
aaggcgacgggcacccgggcgcgcaagcctgcgtga
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