KEGG   Pseudarthrobacter oxydans: SMD14_02175
Entry
SMD14_02175       CDS       T09608                                 
Name
(GenBank) Ku protein
  KO
K10979  DNA end-binding protein Ku
Organism
pok  Pseudarthrobacter oxydans
Pathway
pok03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:pok00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    SMD14_02175
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pok03400]
    SMD14_02175
DNA repair and recombination proteins [BR:pok03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     SMD14_02175
SSDB
Motif
Pfam: Ku
Other DBs
NCBI-ProteinID: WPU09847
LinkDB
Position
482622..483737
AA seq 371 aa
MRAIWKGAIAFGLVNVPVKVYSATEDHDISLHQVHNADGGRIRYQRRCEVCSQVIDYSDI
EKAYEEDGRTVVLSKDELKAIPAENNHEIEVVQFVPSEQLEPMMFEKSYYLEPDSKSPKA
YVLLRSALEDTDRVAIVQFALREKTRLGALRIKDDVLVLQSLLWPDEVREAKFPSLDASV
KISPQERDMSAALVESMAADFDPASFTDDYQVQLRQLIEAKLEQGESLDTEETFGVEAGE
GSKGEVIDLMEALKRSLDRKRGGGSDAAAGRAGGEAGGDSGSEAGEDEAAAKPARKRSTA
AKTSAEKTGTTARSAAAKSTGTQSGADKSGTAKSGTAKSAAAKSTAAKSAEKPAAKASAS
KATGTRARKPA
NT seq 1116 nt   +upstreamnt  +downstreamnt
atgagagccatctggaaaggtgccatcgcgttcggcctggtcaacgtgcccgtgaaggtc
tacagcgccactgaggatcatgacatcagtctgcaccaggtccacaacgccgacggcggc
cggatccgctaccagcggcggtgcgaggtctgcagccaggtcatcgattattcggacatc
gagaaggcctacgaggaggacggccggacggtggtcctgtccaaggacgaactcaaggcc
attccggcggagaacaaccatgagatcgaagtggtgcagttcgtcccgtccgagcagctt
gagcccatgatgttcgagaagagctactaccttgagccggactccaagtctcccaaggcc
tacgtgctgctgcgcagtgcgctggaagacacggacagggtggccattgtccagttcgcg
ctgcgggagaagacccggctgggcgctttgcggatcaaggacgatgtcctggtgctccag
tccctcctgtggccggacgaggtgcgggaagcgaaattcccttcccttgatgcatccgtc
aagatctccccgcaggagcgcgatatgtccgcggccctggtggagtccatggcggccgat
ttcgatcccgcttccttcacggacgactaccaggtccagctccgccagcttattgaggcc
aagctggagcagggtgaatcgctggacaccgaggaaaccttcggcgtggaggccggcgag
ggcagcaagggtgaagtcatcgacctgatggaggcgctgaagcgaagcctggaccggaaa
cggggcggcgggtccgatgccgcggcaggacgggcgggtggcgaagccggcggggactcc
ggcagcgaagccggcgaagacgaagcagccgccaaaccggcgcgcaagcggtctaccgcg
gctaagaccagtgccgaaaagaccggcaccacggcgaggtccgcggcagcaaagtccacg
ggaacgcagtccggcgcagacaaatccggcacggccaagtccggcacggcaaaatccgcc
gccgccaagtcgacagcggccaagtccgccgaaaaacccgccgccaaggcgtccgccagc
aaggcgacgggcacccgggcgcgcaagcctgcgtga

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