Pongo abelii (Sumatran orangutan): 100171682
Help
Entry
100171682 CDS
T01416
Symbol
RXRG
Name
(RefSeq) retinoic acid receptor RXR-gamma
KO
K08526
retinoid X receptor gamma
Organism
pon
Pongo abelii (Sumatran orangutan)
Pathway
pon03320
PPAR signaling pathway
pon04659
Th17 cell differentiation
pon04919
Thyroid hormone signaling pathway
pon04920
Adipocytokine signaling pathway
pon04928
Parathyroid hormone synthesis, secretion and action
pon05200
Pathways in cancer
pon05202
Transcriptional misregulation in cancer
pon05207
Chemical carcinogenesis - receptor activation
pon05216
Thyroid cancer
pon05222
Small cell lung cancer
pon05223
Non-small cell lung cancer
pon05226
Gastric cancer
pon05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
pon00001
]
09150 Organismal Systems
09151 Immune system
04659 Th17 cell differentiation
100171682 (RXRG)
09152 Endocrine system
04920 Adipocytokine signaling pathway
100171682 (RXRG)
03320 PPAR signaling pathway
100171682 (RXRG)
04919 Thyroid hormone signaling pathway
100171682 (RXRG)
04928 Parathyroid hormone synthesis, secretion and action
100171682 (RXRG)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
100171682 (RXRG)
05202 Transcriptional misregulation in cancer
100171682 (RXRG)
05207 Chemical carcinogenesis - receptor activation
100171682 (RXRG)
09162 Cancer: specific types
05226 Gastric cancer
100171682 (RXRG)
05216 Thyroid cancer
100171682 (RXRG)
05222 Small cell lung cancer
100171682 (RXRG)
05223 Non-small cell lung cancer
100171682 (RXRG)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
100171682 (RXRG)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pon03000
]
100171682 (RXRG)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
pon03310
]
100171682 (RXRG)
Transcription factors [BR:
pon03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
100171682 (RXRG)
Nuclear receptors [BR:
pon03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
100171682 (RXRG)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nuc_recep-AF1
Hormone_recep
zf-C4
Motif
Other DBs
NCBI-GeneID:
100171682
NCBI-ProteinID:
NP_001124824
Ensembl:
ENSPPYG00000000571
UniProt:
Q5REL6
A0A2J8SL66
LinkDB
All DBs
Position
1:84745022..84789474
Genome browser
AA seq
463 aa
AA seq
DB search
MYGNYSHFMKFPAGYGGSPGHTGSTSMSPSAALSTGKPMDSHPSYTDTPVSAPRTLSAVG
TPLNALGSPYRVITSAMGPPSGALAAPPGINLVAPPSSQLNVVNSVSSSEDIKPLPGLPG
IGNMNYPSTSPGSLVKHICAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLIYTCRDNKD
CLIDKRQRNRCQYCRYQKCLVMGMKREAVQEERQRSRERAESEAECASSGHEDMPVERIL
EAELAVEPKTESYGDMNMENSTNDPVTNICHAADKQLFTLVEWAKRIPHFSDLTLEDQVI
LLRAGWNELLIASFSHRSVSVQDGILLATGLHVHRSSAHSAGVGSIFDRVLTELVSKMKD
MQMDKSELGCLRAIVLFNPDAKGLSNPSEVETLREKVYATLEAYTKQKYPEQPGRFAKLL
LRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLETPLQIT
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgtatggaaattattctcacttcatgaagtttcccgcaggctatggaggctcccctggc
cacactggctctacatccatgagcccatcagcagccttgtccacagggaagccaatggac
agccaccccagctacacggataccccagtgagtgccccacggactctgagtgcagtgggg
acccccctcaatgccctgggctctccatatcgagtcatcacctctgctatgggcccaccc
tcaggagcactggcagcgcctccaggaatcaacttggttgccccacccagctctcagcta
aatgtggtcaacagtgtcagcagttcagaggacatcaagcccttaccagggcttcccggg
attggaaacatgaactacccatccaccagccctggatctctggttaaacacatctgtgcc
atctgtggagacagatcctcaggaaagcactacggggtatacagttgtgaaggctgcaaa
gggttcttcaagaggacgataaggaaggacctcatctacacgtgtcgggataataaagac
tgcctcattgacaagcgtcagcgcaaccgctgccagtactgtcgctatcagaagtgcctt
gtcatgggcatgaagagggaagctgtgcaagaagaaagacagagaagccgagagcgagcc
gagagtgaggcagaatgtgccagtagtggtcatgaagacatgcctgtggagaggattcta
gaagctgaacttgctgttgaaccaaagacagaatcctatggtgacatgaacatggagaac
tcgacaaatgaccctgttaccaacatatgtcatgctgctgacaagcagcttttcaccctc
gttgaatgggccaagcgtattccccacttctctgacctcaccttggaggaccaggtcatt
ttgcttcgggcagggtggaatgaattgctgattgcctctttctcccaccgctcagtttcc
gtgcaggatggcatccttctggccacgggtttacatgtccacaggagcagtgcccatagt
gctggggtcggctccatctttgacagagttctaactgagctggtttccaaaatgaaagac
atgcagatggacaagtcggagctggggtgcctgcgagccattgtgctctttaacccagat
gccaagggcctgtccaacccctctgaagtggagactctgcgagagaaggtttatgccacc
cttgaggcctacaccaagcagaagtatccagaacagccaggcaggtttgccaagctgctg
ctgcgcctcccagctctgcgctccattggcttgaaatgcctggagcacctcttcttcttc
aagctcatcggggacacccccattgacaccttcctcatggagatgttggagaccccgctg
cagatcacctga
Pongo abelii (Sumatran orangutan): 100460920
Help
Entry
100460920 CDS
T01416
Symbol
RXRB
Name
(RefSeq) retinoic acid receptor RXR-beta isoform X2
KO
K08525
retinoid X receptor beta
Organism
pon
Pongo abelii (Sumatran orangutan)
Pathway
pon03320
PPAR signaling pathway
pon04659
Th17 cell differentiation
pon04919
Thyroid hormone signaling pathway
pon04920
Adipocytokine signaling pathway
pon04928
Parathyroid hormone synthesis, secretion and action
pon05200
Pathways in cancer
pon05202
Transcriptional misregulation in cancer
pon05207
Chemical carcinogenesis - receptor activation
pon05216
Thyroid cancer
pon05222
Small cell lung cancer
pon05223
Non-small cell lung cancer
pon05226
Gastric cancer
pon05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
pon00001
]
09150 Organismal Systems
09151 Immune system
04659 Th17 cell differentiation
100460920 (RXRB)
09152 Endocrine system
04920 Adipocytokine signaling pathway
100460920 (RXRB)
03320 PPAR signaling pathway
100460920 (RXRB)
04919 Thyroid hormone signaling pathway
100460920 (RXRB)
04928 Parathyroid hormone synthesis, secretion and action
100460920 (RXRB)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
100460920 (RXRB)
05202 Transcriptional misregulation in cancer
100460920 (RXRB)
05207 Chemical carcinogenesis - receptor activation
100460920 (RXRB)
09162 Cancer: specific types
05226 Gastric cancer
100460920 (RXRB)
05216 Thyroid cancer
100460920 (RXRB)
05222 Small cell lung cancer
100460920 (RXRB)
05223 Non-small cell lung cancer
100460920 (RXRB)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
100460920 (RXRB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pon03000
]
100460920 (RXRB)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
pon03310
]
100460920 (RXRB)
Transcription factors [BR:
pon03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
100460920 (RXRB)
Nuclear receptors [BR:
pon03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
100460920 (RXRB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Nuc_recep-AF1
Motif
Other DBs
NCBI-GeneID:
100460920
NCBI-ProteinID:
XP_002809190
Ensembl:
ENSPPYG00000017239
UniProt:
H2PL46
LinkDB
All DBs
Position
5:complement(33434557..33441614)
Genome browser
AA seq
532 aa
AA seq
DB search
MSWAARPPFLPQRHAAGQCGPVGVRKEMHCGVASRWRRRRPWLDPAAAAAAVAGGEQQTP
EPEPGEAGRDGMGDSGRDSRSPDSSSPNPLPQGVPPPSPPGPPLPPSTAPSLGGSGAPPP
PPMPPPPLGSPFPVISSSMGSPGLPPPAPPGFSGPVSSPQINSTVSLPGGGSGPPEDVKP
PVLGVRGLHCPPPPGGPGAGKRLCAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYSC
RDNKDCTVDKRQRNRCQYCRYQKCLATGMKREAVQEERQRGKDKDGDGEGAGGAPEEMPV
DRILEAELAVEQKSDQGVEGPGGTGGSGSSPNDPVTNICQAADKQLFTLVEWAKRIPHFS
SLPLDDQVILLRAGWNELLIASFSHRSIDVRDGILLATGLHVHRNSAHSAGVGAIFDRVL
TELVSKMRDMRMDKTELGCLRAIILFNPDAKGLSNPSEVEVLREKVYASLETYCKQKYPE
QQGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQLA
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgtcttgggccgctcgcccgcccttcctccctcagcggcatgccgcagggcagtgtggg
ccggtgggggtgcgaaaagaaatgcattgtggggtcgcgtcccggtggcggcggcgacgg
ccctggctggatcccgcggcggcggcggcggcggtggcaggcggagaacaacaaaccccg
gagccggagccgggggaggctggacgggacgggatgggcgacagcgggcgggactcccga
agcccagacagctcctccccaaatccccttccccagggagtccctcccccttctcctcct
gggccacccctacccccttcaacagctccatcccttggaggctctggggccccaccccca
cccccgatgccaccacccccactgggctctccctttccagtcatcagttcttccatgggg
tcccctggtctgccccctccagctcccccaggattctccgggcctgtcagcagcccccag
attaactcaacagtgtcactccctgggggtgggtctggcccccctgaagatgtgaagcca
ccagtcttaggggtccggggcctgcactgtccaccccctccaggtggccctggggctggc
aaacggctatgtgcaatctgcggggacagaagctcaggcaaacactacggggtttacagc
tgtgagggttgcaagggcttcttcaaacgcaccatccgcaaggaccttacatactcttgc
cgggacaacaaagactgcacagtggacaagcgccagcggaaccgctgtcagtactgccgc
tatcagaagtgcctggccactggcatgaagagggaggcagtacaggaggagcgtcagcgg
ggaaaggacaaggatggggatggggagggggctgggggagccccggaggagatgcctgtg
gacaggatcctggaggcagagcttgctgtggaacagaagagtgaccagggcgttgagggt
cctgggggaaccgggggtagcggcagcagtccaaatgacccggtgactaacatctgtcag
gcagctgacaaacagctattcacgcttgttgagtgggcgaagaggatcccacacttttcc
tccttgcctctggatgatcaggtcatattgctgcgggcaggctggaatgaactcctcatt
gcctccttctcacaccgatccattgatgttcgagatggcatcctccttgccacaggtctt
cacgtgcaccgcaactcagcccattcagcaggagtaggagccatctttgatcgggtgctg
acagagctagtgtccaaaatgcgtgacatgaggatggacaagacagagcttggctgcctg
agggcaatcattctgtttaatccagatgccaagggcctctccaaccctagtgaggtggag
gtcctgcgggagaaagtgtatgcatcactggagacctactgcaaacagaagtaccctgag
cagcagggacggtttgccaagctgctgctacgtcttcctgccctccggtccattggcctt
aagtgtctagagcatctgtttttcttcaagctcattggtgacacccccatcgacaccttc
ctcatggagatgcttgaggctccccatcaactggcctga
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integrated database retrieval system