Pongo abelii (Sumatran orangutan): 100172663
Help
Entry
100172663 CDS
T01416
Gene name
HDAC1
Definition
(RefSeq) histone deacetylase 1
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
pon
Pongo abelii (Sumatran orangutan)
Pathway
pon04110
Cell cycle
pon04213
Longevity regulating pathway - multiple species
pon04330
Notch signaling pathway
pon04613
Neutrophil extracellular trap formation
pon04919
Thyroid hormone signaling pathway
pon05016
Huntington disease
pon05031
Amphetamine addiction
pon05034
Alcoholism
pon05165
Human papillomavirus infection
pon05169
Epstein-Barr virus infection
pon05200
Pathways in cancer
pon05202
Transcriptional misregulation in cancer
pon05203
Viral carcinogenesis
pon05206
MicroRNAs in cancer
pon05220
Chronic myeloid leukemia
Brite
KEGG Orthology (KO) [BR:
pon00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
100172663 (HDAC1)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
100172663 (HDAC1)
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
100172663 (HDAC1)
09152 Endocrine system
04919 Thyroid hormone signaling pathway
100172663 (HDAC1)
09149 Aging
04213 Longevity regulating pathway - multiple species
100172663 (HDAC1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
100172663 (HDAC1)
05202 Transcriptional misregulation in cancer
100172663 (HDAC1)
05206 MicroRNAs in cancer
100172663 (HDAC1)
05203 Viral carcinogenesis
100172663 (HDAC1)
09162 Cancer: specific types
05220 Chronic myeloid leukemia
100172663 (HDAC1)
09164 Neurodegenerative disease
05016 Huntington disease
100172663 (HDAC1)
09165 Substance dependence
05031 Amphetamine addiction
100172663 (HDAC1)
05034 Alcoholism
100172663 (HDAC1)
09172 Infectious disease: viral
05169 Epstein-Barr virus infection
100172663 (HDAC1)
05165 Human papillomavirus infection
100172663 (HDAC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pon03036
]
100172663 (HDAC1)
Enzymes [BR:
pon01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
100172663 (HDAC1)
Chromosome and associated proteins [BR:
pon03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
100172663 (HDAC1)
HDAC complexes
Sin3A-HDAC complex
100172663 (HDAC1)
BRAF-HDAC complex
100172663 (HDAC1)
Heterochromatin formation proteins
Other heterochromatin formation proteins
100172663 (HDAC1)
Chromatin remodeling factors
NuRD complex
100172663 (HDAC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
100172663
NCBI-ProteinID:
NP_001125738
Ensembl:
ENSPPYG00000001595
UniProt:
Q5RAG0
LinkDB
All DBs
Position
1
AA seq
482 aa
AA seq
DB search
MAQTQGTRRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKAN
AEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAS
AVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHG
DGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAI
FKPVMSKVMEMFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSFNLPMLMLGG
GGYTIRNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNEYLE
KIKQRLFENLRMLPHAPGVQMQAIPEDAIPEESGDEDEDDPDKRISICSSDKRIACEEEF
SDSEEEGEGGRKNSSNFKKAKRVKTEDEKEKDPEEKKEVTEEEKTKEEKPEAKGVKEEVK
LA
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagacgcagggcacccggaggaaagtctgttactactacgacggggatgttgga
aattactattatggacaaggccacccaatgaagcctcaccgaatccgcatgactcataat
ttgctgctcaactatggtctctaccgaaaaatggaaatctatcgccctcacaaagccaat
gctgaggagatgaccaagtaccacagcgatgactacattaaattcttgcgctccatccgt
ccagataacatgtcggagtacagcaagcagatgcagagattcaacgttggtgaggactgt
ccagtattcgatggcctgtttgagttctgtcagttgtctactggtggttctgtggcaagt
gctgtgaaacttaataagcagcagacggacatcgctgtgaattgggctgggggcctgcac
catgcaaagaagtccgaggcatctggcttctgttacgtcaatgatatcgtcttggccatc
ctggaactgctaaagtatcaccagagggtgctgtacattgacattgatattcaccatggt
gacggcgtggaagaggccttctacaccacggaccgggtcatgactgtgtcctttcataag
tatggagagtacttcccaggaactggggacctacgggatatcggggctggcaaaggcaag
tattatgctgttaactacccgctccgagacgggattgatgacgagtcctatgaggccatt
ttcaagccggtcatgtccaaagtaatggagatgttccagcctagtgcggtggtcttacag
tgtggctcagactccctatctggggatcggttaggttgcttcaatctaactatcaaagga
cacgccaagtgtgtggaatttgtcaagagctttaacctgcctatgctgatgctgggaggc
ggtggttacaccattcgtaacgttgcccggtgctggacatatgagacagctgtggccctg
gatacggagatccctaatgagcttccatacaatgactactttgaatactttggaccagat
ttcaagctccacatcagtccttccaatatgactaaccagaacacgaatgagtacctggag
aagatcaaacagcgactgtttgagaaccttagaatgctgccgcacgcacctggggtccaa
atgcaggcgattcctgaggacgccatccctgaggagagtggcgatgaggacgaagacgac
cctgacaagcgcatctcgatctgctcctctgacaaacgaattgcctgtgaggaagagttc
tccgattctgaagaggagggagaggggggccgcaagaactcttccaacttcaaaaaagcc
aagagagtcaaaacagaggatgaaaaagagaaagacccagaggagaagaaagaagtcacc
gaagaggagaaaaccaaggaggagaagccagaagccaaaggggtcaaggaggaggtcaag
ttggcctga
Pongo abelii (Sumatran orangutan): 100294534
Help
Entry
100294534 CDS
T01416
Gene name
HDAC2
Definition
(RefSeq) histone deacetylase 2
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
pon
Pongo abelii (Sumatran orangutan)
Pathway
pon04110
Cell cycle
pon04213
Longevity regulating pathway - multiple species
pon04330
Notch signaling pathway
pon04613
Neutrophil extracellular trap formation
pon04919
Thyroid hormone signaling pathway
pon05016
Huntington disease
pon05031
Amphetamine addiction
pon05034
Alcoholism
pon05165
Human papillomavirus infection
pon05169
Epstein-Barr virus infection
pon05200
Pathways in cancer
pon05202
Transcriptional misregulation in cancer
pon05203
Viral carcinogenesis
pon05206
MicroRNAs in cancer
pon05220
Chronic myeloid leukemia
Brite
KEGG Orthology (KO) [BR:
pon00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
100294534 (HDAC2)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
100294534 (HDAC2)
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
100294534 (HDAC2)
09152 Endocrine system
04919 Thyroid hormone signaling pathway
100294534 (HDAC2)
09149 Aging
04213 Longevity regulating pathway - multiple species
100294534 (HDAC2)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
100294534 (HDAC2)
05202 Transcriptional misregulation in cancer
100294534 (HDAC2)
05206 MicroRNAs in cancer
100294534 (HDAC2)
05203 Viral carcinogenesis
100294534 (HDAC2)
09162 Cancer: specific types
05220 Chronic myeloid leukemia
100294534 (HDAC2)
09164 Neurodegenerative disease
05016 Huntington disease
100294534 (HDAC2)
09165 Substance dependence
05031 Amphetamine addiction
100294534 (HDAC2)
05034 Alcoholism
100294534 (HDAC2)
09172 Infectious disease: viral
05169 Epstein-Barr virus infection
100294534 (HDAC2)
05165 Human papillomavirus infection
100294534 (HDAC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pon03036
]
100294534 (HDAC2)
Enzymes [BR:
pon01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
100294534 (HDAC2)
Chromosome and associated proteins [BR:
pon03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
100294534 (HDAC2)
HDAC complexes
Sin3A-HDAC complex
100294534 (HDAC2)
BRAF-HDAC complex
100294534 (HDAC2)
Heterochromatin formation proteins
Other heterochromatin formation proteins
100294534 (HDAC2)
Chromatin remodeling factors
NuRD complex
100294534 (HDAC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
100294534
NCBI-ProteinID:
NP_001153253
UniProt:
Q5R6R9
LinkDB
All DBs
Position
6
AA seq
219 aa
AA seq
DB search
MAYSQGGGKKKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKA
TAEEMTKYHSDEYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVA
GAVKLNRQQTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHH
GDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRVRLNSV
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atggcgtacagtcaaggaggcggcaaaaaaaaagtctgctactactacgacggtgatatt
ggaaattattattatggacagggtcatcccatgaagcctcatagaatccgcatgacccat
aacttgctgttaaattatggcttatacagaaaaatggaaatatataggccccataaagcc
actgccgaagaaatgacaaaatatcacagtgatgagtatatcaaatttctacggtcaata
agaccagataacatgtctgagtatagtaagcagatgcagagatttaatgttggagaagat
tgtccagtgtttgatggactctttgagttttgtcagctctcaactggcggttcagttgct
ggagctgtgaagttaaaccgacaacagactgatatggctgttaactgggctggaggatta
catcatgctaagaaatcagaagcatcaggattctgttacgttaatgatattgtgcttgcc
atcctcgaattactaaagtatcatcagagagtcttatatattgatatagatattcatcat
ggtgatggtgttgaagaagctttttatacaacagatcgtgtaatgacggtatcattccat
aaatatggggaatactttcctggcacaggagacttgagggtaagactaaattctgtctga
DBGET
integrated database retrieval system