Pongo abelii (Sumatran orangutan): 100174343
Help
Entry
100174343 CDS
T01416
Symbol
ACTN4
Name
(RefSeq) alpha-actinin-4
KO
K05699
actinin alpha 1/4
Organism
pon
Pongo abelii (Sumatran orangutan)
Pathway
pon04510
Focal adhesion
pon04520
Adherens junction
pon04530
Tight junction
pon04670
Leukocyte transendothelial migration
pon04810
Regulation of actin cytoskeleton
pon05146
Amoebiasis
pon05203
Viral carcinogenesis
pon05322
Systemic lupus erythematosus
Brite
KEGG Orthology (KO) [BR:
pon00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
100174343 (ACTN4)
04520 Adherens junction
100174343 (ACTN4)
04530 Tight junction
100174343 (ACTN4)
09142 Cell motility
04810 Regulation of actin cytoskeleton
100174343 (ACTN4)
09150 Organismal Systems
09151 Immune system
04670 Leukocyte transendothelial migration
100174343 (ACTN4)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
100174343 (ACTN4)
09174 Infectious disease: parasitic
05146 Amoebiasis
100174343 (ACTN4)
09163 Immune disease
05322 Systemic lupus erythematosus
100174343 (ACTN4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pon04131
]
100174343 (ACTN4)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pon04812
]
100174343 (ACTN4)
04147 Exosome [BR:
pon04147
]
100174343 (ACTN4)
Membrane trafficking [BR:
pon04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
100174343 (ACTN4)
Cytoskeleton proteins [BR:
pon04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
100174343 (ACTN4)
Exosome [BR:
pon04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
100174343 (ACTN4)
Exosomal proteins of colorectal cancer cells
100174343 (ACTN4)
Exosomal proteins of bladder cancer cells
100174343 (ACTN4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
EFhand_Ca_insen
EF-hand_1
EF-hand_6
EF-hand_7
EF-hand_8
XisI
Motif
Other DBs
NCBI-GeneID:
100174343
NCBI-ProteinID:
NP_001127286
Ensembl:
ENSPPYG00000009939
UniProt:
Q5RCS6
LinkDB
All DBs
Position
20:44251244..44334004
Genome browser
AA seq
911 aa
AA seq
DB search
MVDYHAASQSYQYGPSSAGNGAGGGGSMGDYMAQEDDWDRDLLLDPAWEKQQRKTFTAWC
NSHLRKAGTQIENIDEDFRDGLKLMLLLEVISGERLPKPERGKMRVHKINNVNKALDFIA
SKGVKLVSIGAEEIVDGNAKMTLGMIWTIILRFAIQDISVEETSAKEGLLLWCQRKTAPY
KNVNVQNFHISWKDGLAFNALIHRHRPELIEYDKLRKDDPVTNLNNAFEVAEKYLDIPKM
LDAEDIVNTARPDEKAIMTYVSSFYHAFSGAQKAETAANRICRVLAVNQENEHLMEDYEK
LASDLLEWIRRTIPWLEDRVPQKTIQEMQQKLEDFRDYRRVHKPPKVQEKCQLEINFNTL
QTKLRLSNRPAFMPSEGKMVSDINNGWQHLEQAEKGYEEWLLNEIRRLERLDHLAEKFRQ
KASIHEAWTDGKEAMLKHRDYETATLSDIKALIRKHEAFESDLAAHQDRVEQIAAIAQEL
NELDYYDSHNVNTRCQKICDQWDALGSLTHSRREALEKTEKQLEAIDQLHLEYAKRAAPF
NNWMESAMEDLQDMFIVHTIEEIEGLISAHDQFKSTLPDADREREAILAIHKEAQRIAES
NHIKLSGSNPYTTVTPQIINSKWEKVQQLVPKRDHALLEEQSKQQSNEHLRRQFASQANV
VGPWIQTKMEEIGRISIEMNGTLEDQLSHLKQYERSIVDYKPNLDLLEQQHQLIQEALIF
DNKHTNYTMEHIRVGWEQLLTTIARTINEVENQILTRDAKGISQEQMQEFRASFNHFDKD
HGGALGPEEFKACLISLGYDVENDRQGEAEFNRIMSLVDPNHSGLVTFQAFIDFMSRETT
DTDTADQVIASFKVLAGDKNFITAEELRRELPPDQAEYCIARMAPYQGPDAVPGALDYKS
FSTALYGESDL
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atggtggactaccacgcggcgagccagtcgtaccagtacggccccagcagcgcgggcaat
ggcgctggcggcgggggcagcatgggcgactacatggcccaggaggacgactgggaccgg
gacctgctgctggacccggcctgggagaagcagcagcgcaagaccttcacggcgtggtgc
aactcccacttgcggaaggcaggcacacagatcgagaacattgatgaggacttccgagac
gggctcaagctcatgctgctcctggaggtcatatcaggggagcggttacctaagccggag
cgggggaagatgagagtgcacaaaatcaacaatgtgaacaaagcgctggactttattgcc
agcaaaggcgtcaagctggtctccatcggggcagaagagattgtggacggcaatgcaaag
atgaccctgggaatgatctggaccatcatccttaggttcgccatccaggacatctccgtg
gaagagacctcggccaaggaagggctccttctctggtgccagagaaagacagccccgtat
aagaacgtcaatgtgcagaacttccacatcagctggaaggatggtcttgccttcaatgcc
ctgatccaccggcacagaccagagctgattgagtatgacaagctgaggaaggacgaccct
gtcaccaacctgaacaatgccttcgaagtggctgagaaatacctcgacatccccaagatg
ctggatgcagaggacatcgtgaacacggcccggcccgacgagaaggccataatgacctat
gtgtccagcttctaccatgccttttcaggagcgcagaaggctgaaactgccgccaaccgg
atctgcagggtgttggctgtcaaccaagagaacgagcacttgatggaggactacgagaag
ctggccagcgatctcctggagtggatccggcgcaccatcccctggctggaggaccgtgtg
ccccaaaagactatccaggagatgcagcagaagctggaggacttccgcgactaccggcgc
gtgcacaagccgcccaaggtgcaggagaagtgccagctggagatcaacttcaacacactg
cagaccaagctgcgcctcagcaaccggcccgccttcatgccctccgagggcaagatggtc
tcggacatcaacaacggctggcagcacttggagcaggctgagaagggctatgaggaatgg
ctgctgaatgagatccgcaggctggagcggctcgaccacctggcagagaagttccggcag
aaggcctccatccacgaggcctggactgacgggaaggaagccatgctgaagcaccgagac
tacgagacggccacgctatcggacatcaaagccctcattcgcaagcacgaggccttcgag
agtgacctggccgcgcaccaggaccgcgtggagcagatcgccgccattgcccaggagctc
aacgagctggattactacgactcccacaatgtcaacacccggtgccagaagatctgcgac
cagtgggacgccctcggctctctgacgcacagtcgcagggaagccctggagaaaacagag
aagcagctggaggccatcgaccagctgcacctggagtatgccaagcgcgcagccccattc
aacaactggatggagagcgccatggaggacctccaggacatgttcattgtccataccatc
gaggagattgagggcctgatctcagcccacgaccagttcaagtccaccctgccggacgcc
gacagggagcgcgaggccatcctggccatccacaaggaggcccagaggatcgctgaaagt
aaccacatcaagctgtcgggcagcaacccctacaccactgtcaccccacagatcatcaac
tccaagtgggagaaggtacagcagctggtgccaaaacgggaccacgccctcctggaggag
cagagcaagcagcagtccaacgagcacctgcgccgccagtttgccagccaggccaacgtc
gtggggccctggatccagaccaagatggaggagatcgggcgcatctccattgagatgaac
gggaccctggaggaccagctgagccacctgaagcagtatgaacgcagcatcgtggactac
aagcctaacctggacctgctggagcagcagcaccagctcatccaggaggccctcatcttc
gacaacaagcacaccaactataccatggagcacatccgtgtgggctgggagcagctgctc
accaccattgcccgcaccatcaatgaggtggagaaccagatcctcacccgcgacgccaag
ggcatcagccaggagcagatgcaggagttccgggcgtccttcaaccacttcgacaaggat
catggcggggcgctggggcccgaggagttcaaggcctgcctcatcagcctgggctacgac
gtggagaacgaccggcagggtgaggccgagttcaaccgcatcatgagcctggtcgacccc
aaccatagtggccttgtgaccttccaagccttcatcgacttcatgtcgcgggagaccacc
gacacggacacggccgaccaggtcatcgcttccttcaaggtcctggcaggggacaagaac
ttcatcacagctgaggagctgcggagagagctgccccccgaccaggctgagtactgcatc
gcccgcatggcgccgtaccagggccctgatgccgtgcccggcgcccttgactacaagtcc
ttctccacagccctgtatggcgagagcgacctgtga
Pongo abelii (Sumatran orangutan): 100460195
Help
Entry
100460195 CDS
T01416
Symbol
ACTN1
Name
(RefSeq) alpha-actinin-1 isoform X4
KO
K05699
actinin alpha 1/4
Organism
pon
Pongo abelii (Sumatran orangutan)
Pathway
pon04510
Focal adhesion
pon04520
Adherens junction
pon04530
Tight junction
pon04670
Leukocyte transendothelial migration
pon04810
Regulation of actin cytoskeleton
pon05146
Amoebiasis
pon05203
Viral carcinogenesis
pon05322
Systemic lupus erythematosus
Brite
KEGG Orthology (KO) [BR:
pon00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
100460195 (ACTN1)
04520 Adherens junction
100460195 (ACTN1)
04530 Tight junction
100460195 (ACTN1)
09142 Cell motility
04810 Regulation of actin cytoskeleton
100460195 (ACTN1)
09150 Organismal Systems
09151 Immune system
04670 Leukocyte transendothelial migration
100460195 (ACTN1)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
100460195 (ACTN1)
09174 Infectious disease: parasitic
05146 Amoebiasis
100460195 (ACTN1)
09163 Immune disease
05322 Systemic lupus erythematosus
100460195 (ACTN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pon04131
]
100460195 (ACTN1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pon04812
]
100460195 (ACTN1)
04147 Exosome [BR:
pon04147
]
100460195 (ACTN1)
Membrane trafficking [BR:
pon04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
100460195 (ACTN1)
Cytoskeleton proteins [BR:
pon04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
100460195 (ACTN1)
Exosome [BR:
pon04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
100460195 (ACTN1)
Exosomal proteins of colorectal cancer cells
100460195 (ACTN1)
Exosomal proteins of bladder cancer cells
100460195 (ACTN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
EFhand_Ca_insen
EF-hand_1
EF-hand_6
EF-hand_7
EF-hand_8
EF-hand_5
XisI
Motif
Other DBs
NCBI-GeneID:
100460195
NCBI-ProteinID:
XP_024087662
Ensembl:
ENSPPYG00000005935
LinkDB
All DBs
Position
15:complement(73099274..73204622)
Genome browser
AA seq
1020 aa
AA seq
DB search
MPRIPNERRWGEVWATRPGQWRASGGLCPFPPPPPASAHAALVCPPSSVCVEIRSKRPPR
GRQSASPAAAVAASSSLRQQRRGGTGRRGASPAPPAQPSPTPSPRQGSSRCSERRWRKKS
RPQHARTIMDHYDSQQTNDYMQPEEDWDRDLLLDPAWEKQQRKTFTAWCNSHLRKAGTQI
ENIEEDFRDGLKLMLLLEVISGERLAKPERGKMRVHKISNVNKALDFIASKGVKLVSIGA
EEIVDGNVKMTLGMIWTIILRFAIQDISVEETSAKEGLLLWCQRKTAPYKNVNIQNFHIS
WKDGLGFCALIHRHRPELIDYGKLRKDDPLTNLNTAFDVAEKYLDIPKMLDAEDIVGTAR
PDEKAIMTYVSSFYHAFSGAQKAETAANRICKVLAVNQENEQLMEDYEKLASDLLEWIRR
TIPWLENRVPENTMHAMQQKLEDFRDYRRLHKPPKVQEKCQLEINFNTLQTKLRLSNRPA
FMPSEGRMVSDINNAWGCLEQVEKGYEEWLLNEIRRLERLDHLAEKFRQKASIHEAWTDG
KEAMLRQKDYETATLSEIKALLKKHEAFESDLAAHQDRVEQIAAIAQELNELDYYDSPSV
NARCQKICDQWDNLGALTQKRREALERTEKLLETIDQLYLEYAKRAAPFNNWMEGAMEDL
QDTFIVHTIEEIQGLTTAHEQFKATLPDADKERLAILGIHNEVSKIVQTYHVNMAGTNPY
TTITPQEINGKWDHVRQLVPRRDQALTEEHARQQHNERLRKQFGAQANVIGPWIQTKMEE
IGRISIEMHGTLEDQLSHLRQYEKSIVNYKPKIDQLEGDHQLIQEALIFDNKHTNYTMEH
IRVGWEQLLTTIARTINEVENQILTRDAKGISQEQMNEFRASFNHFDRDHSGTLGPEEFK
ACLISLGYDIGNDPQGEAEFARIMSIVDPNRLGVVTFQAFIDFMSRETADTDTADQVMAS
FKILAGDKNYITMDELRRELPPDQAEYCIARMAPYTGPDSVPGALDYMSFSTALYGESDL
NT seq
3063 nt
NT seq
+upstream
nt +downstream
nt
atgccaagaattcccaatgagaggcgatggggggaagtttgggcaactcggcctggccaa
tggagagcctcgggagggctctgccccttccccccgcccccgcccgcctcggctcacgca
gcgctagtgtgtccgcctagctcagtgtgcgtggagattaggtccaagcgcccgcccaga
ggcaggcagtccgcgagcccagccgccgctgtcgccgccagtagcagccttcgccagcag
cgccgcggcggaaccgggcgcaggggagcgagcccggccccgccagcccagcccagccct
actccctccccacgccagggcagcagccgttgctcagagagaaggtggaggaagaaatcc
agaccccagcacgcgcgcaccatcatggaccattatgattctcagcaaaccaacgattac
atgcagccagaagaggactgggaccgggacctgctcctggacccggcctgggagaagcag
cagagaaagacattcacggcatggtgtaactcccacctccggaaggcggggacacagatc
gagaacatcgaagaggacttccgggatggcctgaagctcatgctgctgctggaggtcatc
tcaggtgaacgcttggctaagccagagcgaggcaagatgagagtgcacaagatctccaac
gtcaacaaggccctggatttcatagctagcaaaggcgtcaaactggtgtccatcggagcc
gaagaaatcgtggatgggaatgtgaagatgaccctgggcatgatctggaccatcatcctg
cgctttgccatccaggacatctctgtggaagagacttcagctaaggaagggctgctcctg
tggtgtcagagaaagacagccccttacaaaaacgtcaacatccagaacttccacataagc
tggaaggatggcctcggcttctgtgccttgattcaccgacaccggcccgagctgattgac
tacgggaagctgcggaaggatgatccactcacaaatctgaatacggcttttgacgtggca
gagaagtacctggacatccctaagatgctggatgccgaagacatcgttggaactgcccga
ccggatgagaaagccatcatgacttatgtgtctagcttctaccacgccttctctggagcc
cagaaggcggagacagcagccaatcgcatctgcaaggtgttggccgtcaaccaggagaac
gagcagcttatggaagactacgagaagttggccagtgatctgttggagtggatccgccgc
acaatcccgtggctggagaaccgggtgcccgagaacaccatgcatgccatgcagcagaag
ctggaggatttccgggactaccggcgcctgcacaagccgcccaaggtgcaggagaagtgc
cagctggagatcaacttcaacacgctgcagaccaagctgcggctcagcaaccggcctgcc
ttcatgccctctgagggcaggatggtctcggacatcaacaatgcctggggctgcctggag
caggtggagaagggctatgaggagtggttgctgaacgagatccggaggctggagcgactg
gaccacctggcagagaagttccggcagaaggcctccatccacgaggcctggactgacggc
aaagaggccatgctgcgacagaaggactatgagacagccaccctctcggagatcaaggcc
ctgctcaagaagcatgaggccttcgagagtgacctggctgcccaccaggaccgcgtggag
cagattgccgccatcgcacaggagctcaatgagctggactattatgactcacccagtgtc
aacgcccgttgccaaaagatctgtgaccagtgggacaatctgggggccctaactcagaag
cgaagggaagctctggagcggaccgagaaactgctggagaccattgaccagctgtacttg
gagtatgccaagcgggctgcacccttcaacaactggatggagggggccatggaggacctg
caggacaccttcattgtgcacaccattgaggagatccagggactgaccacagcccatgag
cagttcaaggccaccctccctgatgccgacaaggagcgcctggccatactgggcatccac
aacgaggtgtccaagattgtccagacctaccacgtcaatatggcgggcaccaacccctac
acaaccatcacgcctcaggagatcaatggcaaatgggaccacgtgcggcagctggtgcca
cggagggaccaagctctgacggaggagcatgcccgacagcagcacaatgagaggctacgc
aagcagtttggggcccaggccaatgtcatcgggccctggatccagaccaagatggaggag
atcgggaggatctccattgagatgcacgggaccctggaggaccagctcagccacctgcgg
cagtatgagaagagtatcgtcaactacaagccaaagattgatcagctggagggcgaccac
cagctcatccaggaggcactcatctttgacaacaagcacaccaactacaccatggagcac
atccgtgtgggctgggagcagctgctcaccaccatcgccaggaccatcaatgaggtggag
aaccagatcctgacccgggatgccaagggcattagccaggagcagatgaatgagttccgg
gcctccttcaaccactttgaccgggatcactccggcacactgggtcccgaggagttcaaa
gcctgcctcatcagcttgggttatgatattggcaacgacccccagggagaagcagaattt
gcccgcatcatgagcattgtggaccccaaccgcctgggggtagtgacattccaggccttc
attgacttcatgtcccgcgagacagccgacacagatacagcagaccaagtcatggcttcc
ttcaagatcctggccggggacaagaactacattaccatggacgagctgcgccgcgagctg
ccgcccgaccaggctgagtactgcatcgcgcggatggccccctacaccggccccgactcc
gtgccaggtgctctggactacatgtccttctccacggcgctgtacggcgagagtgacctc
taa
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integrated database retrieval system