Pongo abelii (Sumatran orangutan): 100443975
Help
Entry
100443975 CDS
T01416
Symbol
LTN1
Name
(RefSeq) E3 ubiquitin-protein ligase listerin
KO
K22377
E3 ubiquitin-protein ligase listerin [EC:
2.3.2.27
]
Organism
pon
Pongo abelii (Sumatran orangutan)
Brite
KEGG Orthology (KO) [BR:
pon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pon03009
]
100443975 (LTN1)
04121 Ubiquitin system [BR:
pon04121
]
100443975 (LTN1)
Enzymes [BR:
pon01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100443975 (LTN1)
Ribosome biogenesis [BR:
pon03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
100443975 (LTN1)
Ubiquitin system [BR:
pon04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100443975 (LTN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
FANCL_C
zf-ANAPC11
zf-rbx1
RINGv
zf-RING-like
HipN
Motif
Other DBs
NCBI-GeneID:
100443975
NCBI-ProteinID:
XP_002830634
Ensembl:
ENSPPYG00000011315
LinkDB
All DBs
Position
21:complement(16513009..16577501)
Genome browser
AA seq
1812 aa
AA seq
DB search
MDRVGGGKGPGGSYYRESSSGARGRKLCPGRVNRGLSAQSTAATATMGGKNKQRTKGNLR
PSNSGRAAELLAKEQGTVPGFIGFGTSQSDLGYVPAIQGAEEIDSLVDSDFRMVLRKLSK
KDVTTKLKAMQEFGTMCTERDTETVKGVLPYWPRIFCKISLDHDRRVREATQQAFEKLIL
KVKKQLAPYLKSLMGYWLMAQCDTYTPAAFAAKDAFEAAFPPSKQPEAIAFCKDEITSVL
QDHLIKETPDTLSDPQTVPEEEREAKFYRVVTCSLLALKKLLCLLPDNELYSLEEKFKSL
LSQNKFWKYGKHSVPQIRSAYFELVSALCQRIPQLMKEEASKVSPSVLLSIDDSDPIVCP
ALWEAVLYTLTTIEDCWLHVNAKKSVFPKLSTVIREGGRGLATVIYPYLLPFISKLPQSI
TNPKLDFFKNFLTSLVAGLSTERTKTSSSESSAVISAFFECLRFIMQQNLGEEEIEQMLV
NDQLIPFIDAVLKDPGLQHGQLFHHLAETLSSWEAKADMEKDEKTAHNLENVLIHFWERL
SDICVAKINEPEADVESVLGVSNLLQVLQKPKSSLKSNKKKNGKVRFADEILESNKENEK
CVSSKGENIEGWELTTEPSLTHNSAVLLSPLRKKPLEDLVCKLADISINYVNERKSEQHL
RFLSTLLDSFSSSRVFKMLLGDEKQSIVQAKPLEIAKLAQKNPAVQFLYQKLIGWLNEDQ
RKDFGFLVDILYSALQCCDNDMERKKVLDDLTKVDLKWNSLLKIIEKACSSSDKHALVTP
WLKGDILGEKLVNLADCLCNEDLESRVSSESHFSERWTLLSLVLSQHVKNDYLIGDIYVE
RIIVKLHETLFKTKKLSEAESSDSSVSFICDVAYNYFSSAKGCLLMPSSEDLLLTLFQLC
AQSKEKTHLPDFLICKLKNTWLSGVNLLVHQTDSSYKESTFLHLSALWLKNQVQASSLDI
NSLQVLLSAVDDLLNTLLESEDSYLMGVYIGSVMPNDSEWEKMRQSLPMQWLHRPLLEGR
LSLNYECFKTDFKEQDIKTLPSHLCTSALLSKMILIALRKETVLENNELEKIIAELLYSL
QWCEELDNPPIFLTGFCEMLQKMNITYDNLRVLGNTSGLLQLLFNRSREHGTLWSLIVAK
LILSRSISSDEVKPHYKRKESFFPLTEGNLHTIQSLCPFLSKEEKKEFSAQCIPALLGWT
KKDLCSTNGGFGHLAIFNSCLQTKSIDDGELLHGILKIIISWKKEHEDIFLFSCNLSEAS
PEVLGVNIEIIRFLSLFLKYCSSPLAESEWDFIMCSMLAWLETTSENQALYSIPLVQLFA
CVSCDLACDLSAFFDSTTLDTIGNLPVNLISEWKEFFSQGIHSLLLPILVTVTGENKDVS
ETSFQNAMLKPMCETLTYISKEQLLSHKLPARLVADQKTNLPEYLQTLLNTLAPLLLFRA
RPVQIAVYHMLYKLMPELPQYDQDNLKSYGDEEEEPALSPPAPLMSLLSTQEDLLENVLG
CIPVGQIVTIKPLSEDFCYVLGYLLTWKLILTFFKAASSQLRALYSMYLRKTKSLNKLLY
HLFRLMPENPTYAETAIEVPNKDPKTFFTEELQLSIRETTTLPYHIPHLACSVYHMTLKD
LPAMVRLWWNSSEKRVFNIVDRFTSKYVSSVLSFQEISSVQTSTQLFNGMTVKARATTRE
VMATYTIEDIVIELIIQLPSNYPLGSITVESGKRVGVAVQQWRNWMLQLSTYLTHQNGSI
MEGLALWKNNVDKRFEGVEDCMICFSVIHGFNYSLPKKACRTCKKKFHSACLYKWFTSSN
KSTCPLCRETFF
NT seq
5439 nt
NT seq
+upstream
nt +downstream
nt
atggacagggtgggtggtggaaaagggcccgggggaagttattacagggagtcctcttcc
ggcgccagaggccggaagttgtgtcccggacgtgtcaaccggggtctgagtgctcagagt
acagctgcaaccgcgaccatgggcgggaagaacaagcagcgaactaaagggaacctgagg
ccttcaaacagtggccgagccgcagaactccttgccaaagaacagggaacagtgcctgga
tttattggttttggaacatctcagagtgacctaggctatgttcctgctattcaaggagct
gaagaaattgacagtcttgtagattctgatttccgaatggtgctgcggaaactttcaaag
aaagatgtcaccacaaaattaaaagctatgcaggaatttggaaccatgtgtacagagaga
gacacagaaactgtgaaaggagttcttccatattggcctagaattttttgcaaaatttca
cttgatcatgaccgtcgggtccgagaagccacacaacaagcttttgaaaaacttatcctt
aaagtaaagaaacagttggctccctacttaaaaagtttaatgggatattggctaatggct
cagtgtgatacttacacaccagctgcatttgcagcaaaagatgcatttgaagcggctttt
cctccaagcaagcaacctgaagccatagcattttgtaaggatgaaattacaagtgtgctg
caggatcatcttataaaagaaacacctgatacactcagtgacccacaaactgttccagag
gaagaaagagaagctaaattctaccgggttgtaacttgttccttattggcattaaagaaa
ttgctttgccttttacctgataatgagctttattctctggaggagaaatttaagtctctt
ttatcacagaataagttttggaagtatggaaaacacagtgtacctcagattcgctcagct
tattttgagttagtttctgcattgtgccagcgcattccacagttgatgaaagaggaagca
tccaaagtgagcccatcagttctacttagcattgatgacagtgacccaattgtctgccca
gctctctgggaagctgtactctatacacttacaactattgaggactgttggcttcatgta
aatgcaaaaaagagtgtgtttcccaagctctcaactgtgattcgtgaaggtggtcggggt
ctagctactgtcatatatccttaccttctgccattcatcagcaagctccctcagtccatc
acaaatccaaagttggatttcttcaaaaatttcctcacgtctctagttgctgggctgtca
acagagagaactaaaaccagctcttcagagtcctcggcagtaatatctgctttttttgaa
tgcttacgttttataatgcagcaaaacttaggtgaggaagagattgaacagatgctcgtc
aatgatcagttgatcccttttattgatgcagttctcaaagacccagggttgcaacatggg
cagctatttcaccatttagcagaaactctaagttcctgggaagccaaagcagacatggaa
aaagatgaaaaaacagctcacaacttggagaacgtactgatacatttctgggaaagactg
tcagatatctgtgtcgcgaaaatcaatgagccagaagcagatgttgagtccgttttgggt
gtatctaacctattacaggtgcttcagaagccaaagagctcattgaaatcaaataaaaaa
aaaaatggtaaggttagatttgctgatgagatacttgaaagcaataaagagaatgaaaaa
tgtgtatcttcaaaaggagagaacattgaaggctgggaattaacaactgaaccttctctc
actcataattctgcagtccttttgtctcctctaaggaaaaaacctttggaagacttagtc
tgtaaactcgcagatataagtattaattatgtcaatgaacgaaagtcagagcaacatcta
aggtttctttctactctgcttgactccttttcttcaagccgagtatttaaaatgctactt
ggtgatgaaaaacagagtattgtccaagccaaacctcttgaaatagccaagcttgcacaa
aaaaatcctgcggtgcagtttttataccagaaactgataggttggctaaatgaagatcaa
aggaaggattttggtttcctagtggacattttgtacagtgctctccagtgctgtgacaat
gatatggaaagaaaaaaagtcttggatgatctaaccaaggtggacttgaaatggaattct
cttcttaagattattgaaaaggcgtgttctagttcagataaacatgctttagtaactcct
tggctcaaaggcgatatccttggtgagaaattggtcaacttggcagattgtctttgtaat
gaggacttggaatccagggtatcttcagaatctcacttctcagaaagatggactcttcta
agcttggtattatcccaacatgttaaaaatgattacttgattggagacatatatgttgaa
agaatcattgttaaacttcatgaaactttattcaaaacaaagaaattatcagaagctgaa
agtagtgactcatcagtgtcttttatctgtgatgtggcctataactatttcagctcagcg
aaaggatgcttgctaatgccatcatctgaagatttattattaactctctttcagttatgt
gctcagagcaaagaaaaaacacatttgccagattttcttatctgtaaactgaaaaatact
tggctctctggtgtaaatttattggttcatcaaactgacagttcatataaagagagtacc
ttcctacatttgtctgctctgtggctgaagaaccaagttcaggcttcatctttggatatc
aacagtctccaagtcctcttgtctgctgttgatgatttactaaatacacttctagagagt
gaagattcttatcttatgggagtttatattggaagtgtaatgccaaacgacagtgaatgg
gaaaagatgaggcagtctcttcctatgcagtggttacatagacctcttttagagggaaga
ttgagtttgaattatgaatgtttcaaaacagattttaaggaacaggacataaagacactt
cccagccatttgtgtacttcagcattattgagcaaaatgatcttaattgcactgagaaag
gaaacagtcttagaaaataatgagcttgagaaaataattgcagaactgctttattcactg
cagtggtgtgaagaattagataacccacctatttttctaactggattttgtgaaatgctt
caaaaaatgaatattacgtatgataacttacgtgtacttggtaatacgtcgggccttttg
cagctgttatttaataggtccagagaacatggcacactgtggtctcttattgttgctaag
ttgatcctttcccgaagcatttcatctgatgaagtaaaaccacattataagagaaaagaa
agttttttcccactaactgaaggcaatttgcataccattcaaagtctatgtccatttttg
tcaaaagaagaaaagaaagaatttagtgctcaatgtatacctgctcttttgggctggact
aagaaagatctttgcagcactaatggaggttttggacatcttgccattttcaattcttgt
ctgcaaaccaaaagtatagatgatggagagctattacatggaatattaaaaatcataata
tcctggaagaaagagcatgaagatatttttcttttcagttgtaatctatcagaagcaagt
ccagaggtactgggtgtaaatatagaaataatccgatttctttccctatttctgaaatat
tgctcatcccctttggcagagagtgagtgggacttcatcatgtgctccatgttggcttgg
ttggagacaacaagtgagaatcaggcattgtattctattccacttgtgcagctgtttgcc
tgtgtcagctgtgatttggcctgtgacctcagtgctttctttgattccacaactctggat
accattggcaatcttcctgtaaatctaatcagtgaatggaaagaatttttttcccaaggc
atccacagtttgcttttacctattttggtgactgttacaggagaaaacaaagatgtgtct
gaaacatcctttcagaatgcaatgctgaaacccatgtgtgaaacattaacttatatctca
aaggaacagctcttgagtcacaaacttcctgcaagattagttgctgaccaaaaaacaaac
ttaccagaatatctccagactttgttaaatacattggccccattactcctcttcagagct
aggcctgtgcaaattgctgtttatcatatgctatacaaattgatgcctgaattaccacaa
tatgatcaggataatctaaagtcatatggagatgaagaagaagagccagccctgtcacca
ccagcaccactgatgtctcttcttagcactcaagaggacttactagaaaatgttttgggg
tgtattcctgttggacagatagttactattaaaccactgagtgaagacttctgttatgtt
ctgggataccttctcacttggaaattaatactaactttcttcaaagctgcgtcatcacag
cttcgggctctgtattcgatgtatcttcggaaaacaaagagcttgaataaattgctctat
cacctgttcaggcttatgccagaaaatccaacctatgcagagacagcaattgaggtccca
aataaggaccctaaaacattctttactgaggagctccagctgagtattagagaaacaaca
acgcttccataccacattccacacttggcttgttcagtctatcatatgacattaaaagac
ttgcctgccatggttaggttgtggtggaatagcagtgagaagcgtgttttcaatattgtg
gatagatttacaagcaagtatgtcagcagtgttctttcttttcaagaaatatcttctgta
caaacaagtacacaactatttaatggcatgacggttaaagctagagctactactcgagag
gtaatggctacttatactattgaggacatagttattgaacttataatacaactgccttca
aattatccactgggttcaataacagtagaaagcgggaaaagagtaggagtagctgttcag
cagtggcggaactggatgctgcagttaagcacttacctcacccatcagaatggaagtatt
atggaaggcttagctttgtggaaaaataatgtagacaaacgttttgagggtgttgaagat
tgcatgatctgtttctcagtcattcacggtttcaactattcccttcccaaaaaagcctgt
agaacatgcaagaaaaaattccattcagcctgcttgtacaaatggtttacatctagcaac
aaatctacttgtccactgtgtcgtgagacgtttttctga
DBGET
integrated database retrieval system
