Populus trichocarpa (black cottonwood): 18104416
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Entry
18104416 CDS
T01077
Name
(RefSeq) transcription factor IIIA
KO
K09191
general transcription factor IIIA
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pop03000
]
18104416
03021 Transcription machinery [BR:
pop03021
]
18104416
Transcription factors [BR:
pop03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
18104416
Transcription machinery [BR:
pop03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIA
18104416
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
DUF7565
zf-H2C2_2
Zap1_zf1
FOXP-CC
zf-met
zf-C2H2_8
Motif
Other DBs
NCBI-GeneID:
18104416
NCBI-ProteinID:
XP_006376244
UniProt:
U5FVV9
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All DBs
Position
13:11715215..11717885
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AA seq
370 aa
AA seq
DB search
MAMIEEEQVEKERPVIFRDIRRYYCDYCGICRSKKSLITSHVLTHHKEEMDEESVDGDEG
KEGVKSNTCENCGASFKKPAYLIQHMQSHSLERPFKCLFDDCHASYRRKDHLTRHLLQHE
GKLFKCQIENCNREFVYPSNLKRHVRELHDESFPSCSFGGEKQYVCQEPGCGKAFRYPSK
LRKHEDSHVSLDHVEAMCLEPGCMKHFSNKECLKAHIQSSHQYINCDICGTKQLKKNIKR
HLRTHEPASDSTERIKCHFNGCQHTFSTKTNLNQHVKAVHLEHRPFLCGFPGCDMRFSYK
HVRDNHEKSGLHVYTPGDFVESDRQFRSKPRGGRKRKFPTVEMLIRKRVTPPTKLDECHP
WLHEIEREDQ
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgatagaagaagaacaagtggagaaagaaaggccagttatattcagagatata
aggcgttattattgtgattattgtggtatttgcagatctaagaagtctcttatcacttct
cacgtcctcactcatcacaaggaggagatggacgaggaaagtgttgatggggatgaggga
aaggagggagtcaaatccaacacatgtgaaaattgcggtgctagttttaaaaagcctgcg
tatttgattcaacacatgcaaagtcattctcttgagaggccatttaagtgcttgtttgat
gattgccatgccagctatagaaggaaagatcacttaactcgccaccttctccagcatgaa
gggaaacttttcaagtgtcaaattgagaattgcaatcgtgaatttgtttacccaagcaac
ttgaaaaggcatgttagagaacttcatgatgagagttttccctcctgtagttttggaggt
gagaagcagtatgtttgccaggagccgggatgtgggaaggcattcagatacccatcaaag
ctgcgaaagcacgaggattctcatgtgagcctggaccacgtggaggcaatgtgtttagaa
ccaggctgtatgaaacatttttcaaataaggaatgcctgaaggcccacattcagtccagc
caccaatacattaactgtgatatctgtggcacaaaacagctgaaaaagaacatcaagagg
catctccgcacccatgaacctgccagtgattcaacagagagaatcaaatgccatttcaat
ggttgtcagcacacattctctactaaaacaaatcttaatcagcatgtgaaggcagtgcac
cttgaacacaggccttttttgtgtggatttccaggttgtgacatgagattctcatacaag
catgtgagagataaccatgaaaagtctggtttgcatgtctatactcctggtgattttgtg
gagtctgatcggcagttcaggtcaaagccaagaggtgggaggaagaggaaattcccaacc
gttgaaatgttgatacgcaagagagtaactccaccaactaaattggatgagtgccacccg
tggttgcatgaaattgagagagaggaccagtag
DBGET
integrated database retrieval system