Populus trichocarpa (black cottonwood): 7460515
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Entry
7460515 CDS
T01077
Name
(RefSeq) uncharacterized protein LOC7460515
KO
K11269
chromosome transmission fidelity protein 18
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pop03036
]
7460515
Chromosome and associated proteins [BR:
pop03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
7460515
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Rad17
AAA_5
AAA_22
RuvB_N
AAA_14
AAA_18
nSTAND3
NB-ARC
AAA_assoc_2
AAA_33
AAA_16
AAA_24
RsgA_GTPase
AAA_17
Zeta_toxin
EMG1
AAA_25
NTPase_1
IstB_IS21
Motif
Other DBs
NCBI-GeneID:
7460515
NCBI-ProteinID:
XP_024459318
LinkDB
All DBs
Position
1:complement(3809707..3823338)
Genome browser
AA seq
966 aa
AA seq
DB search
MEMDIPLPDELELLEANSHFYQDYLDPPSPDPCTYSPQLLPEQSPPQSPSAPQINDYNKR
PRSDGPDSPNQEDAVLFDEKRSKIDDDTGPEVDDEDWLRQVQDRNGGNEEERVEVVVEEE
EKEKIVSRYVSEIDGDFIPVTAPSGGDRVYAKICRVDTEQGAKKLDFKSQSNGLISEPIN
VLLQRMEQEAFTKALQASSEDQNDDILPETQVMHEKLWVDKYAPNSFTELLSDEQTNREV
LLWFKQWDSCVFGSDIRSTSDDILSALRRHSSIAQHPKPSDSTFFSKNKGNIWSRGNFRH
SNNLEQENSKSKGFQDSWTKKSRPTGPPEQKILLLCGPPGLGKTTLAHVAAKHCGYRVVE
INASDDRSSSTIEAKILDVVQMNSVMADSRPKCLVIDEIDGALSDGKGAVEVLLKMVFSE
RKSDTGKENVTKGEQFGRVSSKKGRKTASLTRPVICICNDIYAPALRPLRQVAKVHLFVQ
PTVSRVVSRLKYICNKEGMKTSSIALAALADYTGCDIRSCLNTLQFLNKKREVLNVLEIS
SQVVGRKDMSRSVFDIWKEIFQKRKMKQDRKSKGSCGSMSNEFDSLLSLVSNRGDYDVIL
DGIYENILQLHYHDPVMQKTVKCFNSLGVSDVIHQYIMRSQQMPLYAYQPCIAISIHQQV
AQIQKPNIEWPRSYQRYRTVLMEKRDKLRSWQNKIPPHISRHLSTKSFVEDSVSPILHII
SPPTLRPVALHLLTEREKNDLAQLVSTMVSYSMTYKNIKSDHLSCKQENEAVLDAASLSV
DPPIHEFINFKGYSSGHYALPLAVKQVLVHEVEKHKILQASRSVHLTDGCNKQNMYLVER
ESAVQSVKINHAAAFSGNSIGNQKSMINSGQCVPSDSATSPIMDSSTRALSNVKLKSSGN
PKKPPRSSTSFFDRFRKANSKGSQSTDSAGWETTTLERDSRPLIFKFNEGFTNAVKRPVR
MREFLL
NT seq
2901 nt
NT seq
+upstream
nt +downstream
nt
atggagatggacattcctctcccggacgagcttgaattacttgaagctaactctcacttc
taccaagactacctagaccctccctcacccgatccctgcacttactcgcctcaactacta
ccggaacaatcacctcctcaatcaccctccgctccccaaattaacgactacaacaagcgc
cctaggtccgacggtccggattcaccaaatcaggaagacgctgtcctcttcgacgagaag
agaagcaaaatcgacgatgatacgggaccggaggtcgacgatgaggactggctccggcag
gtgcaggataggaacggaggaaacgaggaggagagggtggaagttgttgtcgaggaggag
gagaaggagaagatcgtgtctagatacgtgtcggagattgacggcgattttattccagtg
acggcgcctagtggtggcgatagggtttatgcaaaaatatgtagagtggatacggaacag
ggagcgaagaaattggatttcaaatcgcaatcaaatggtcttatatcggaaccgattaat
gttcttttgcaaagaatggagcaagaagcttttaccaaggccttgcaagctagttctgaa
gatcagaatgatgacattcttccagaaacacaagtgatgcatgaaaaattatgggtggac
aaatatgctccaaattcatttactgagctgcttagtgatgagcagacaaatcgcgaggtc
ctcttatggtttaaacaatgggattcttgtgtttttggatctgatattaggagtacatca
gatgacattttgtctgctttaaggcgtcattcttctatcgctcaacacccaaaaccttct
gattcaactttcttcagcaagaacaaaggaaatatatggagtagagggaattttagacac
tctaataatctggagcaagaaaatagtaaatcaaaaggatttcaggactcgtggaccaag
aagtcaaggcctactggtccaccagaacagaagatccttttgctttgtggtccccccggg
cttggaaagaccacacttgcacatgtagctgctaagcattgtggatatcgagttgtggag
attaatgctagcgatgataggtcttcgtcaacaatcgaagctaagattcttgatgtggtt
cagatgaactctgtgatggctgactcaagaccgaaatgcctggtgattgatgaaatagat
ggagcacttagtgatggaaaaggtgctgtggaggttcttctaaaaatggttttttctgaa
aggaagtcagatactgggaaggaaaatgtcactaaaggagagcaatttggaagggtatcc
tcaaaaaaagggcggaaaacagcatctttgacgagacctgtgatttgcatatgtaatgac
atatatgcacctgccttgaggccattacgtcaggttgcaaaggtccatttatttgttcag
ccgactgttagccgtgttgtaagcaggctcaaatatatatgtaacaaggagggaatgaag
actagttccattgcacttgccgcacttgcagattacactggatgtgatatacgctcatgc
ctgaacaccctccagtttctcaacaagaagagagaagttcttaacgtgctggagatcagt
tcccaggtggttggtcgaaaggacatgtcaagaagtgtttttgatatttggaaggagatt
ttccaaaagagaaaaatgaagcaggatagaaaatctaaaggtagctgtggcagcatgagc
aatgaatttgactctttgctctcccttgtatctaatcgtggtgattatgatgtgattttg
gatgggatctatgaaaacatcttgcagctccattaccatgatccagtgatgcaaaagaca
gtcaagtgtttcaatagtcttggtgtttctgatgtgattcaccaatatattatgcgttca
cagcaaatgcccctttatgcttatcagccttgcattgcgatttctatacatcaacaggta
gcacaaattcaaaaaccaaatattgagtggccaaggtcttatcaaagataccgaactgta
ttgatggaaaagagggacaagttaaggtcttggcagaacaaaattccaccacatatttca
aggcacttgtctactaaatctttcgtagaagactctgtttctcccatcttacatatcatc
tctcctccaacactaaggccggtggcattgcacttattaacagaaagagagaagaatgat
ctagctcagttagtgagcacaatggtatcctattccatgacatataagaatatcaagtca
gatcatctttcctgtaagcaggaaaacgaagctgttttagatgctgcgtcgctttctgtt
gatcctcccattcatgaattcattaacttcaagggctatagttctggtcattatgcactt
cccttagccgtgaagcaggttttggtgcacgaggtggaaaagcataagattttgcaagca
agtagatctgtacatttaacagatgggtgcaataaacaaaatatgtacttggtagagcgg
gagagtgcagtgcagtctgtcaaaattaaccatgcagctgcattttctggtaacagcatc
ggcaatcaaaaaagcatgataaattctgggcaatgtgttccaagtgactcagcaacatct
ccgatcatggattctagtacaagggccttgtccaatgtaaagctgaaatcctcaggaaat
ccaaagaagcctcctagaagctctaccagcttctttgacaggtttaggaaagcaaacagt
aagggttctcaaagtactgacagtgctggatgggagacaaccaccttggaaagagattca
cgtcctctgatattcaaatttaatgagggttttacaaatgctgtaaaaaggccagtacgg
atgcgtgaatttctgctatga
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