Populus trichocarpa (black cottonwood): 7461370
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Entry
7461370 CDS
T01077
Name
(RefSeq) phytoene synthase 2, chloroplastic isoform X1
KO
K02291
15-cis-phytoene synthase [EC:
2.5.1.32
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00906
Carotenoid biosynthesis
pop01100
Metabolic pathways
pop01110
Biosynthesis of secondary metabolites
Module
pop_M00097
beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
7461370
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
pop01006
]
7461370
Enzymes [BR:
pop01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.32 15-cis-phytoene synthase
7461370
Prenyltransferases [BR:
pop01006
]
Terpene biosynthesis
Squalene/phytoene synthase
7461370
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
HTH_25
Motif
Other DBs
NCBI-GeneID:
7461370
NCBI-ProteinID:
XP_002304008
UniProt:
B9GY90
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Position
3:complement(21305596..21308211)
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AA seq
384 aa
AA seq
DB search
MCSTFSVSTNPCSYGANNARFLHSKSFVTRTRAQGIRAHKCSSSGAIPRPLIKEFIPRTG
LRVHEIVERQSQANNLTKQDACRRVEMNLTLLEEAYKRSRNICAEYARTYYLASLLMTEE
RQKAIWAIYAWGTRIDEMVDGPNAVYMGTSLLDRWEERLQDIFDGRPYDILDAALTDTVS
NFCLDIKPFKEMIEGMRMDTWKSRYKNFQELYLYCYYVAGTAGIMTVPVMGIAPESSVST
KSIYNAAIHFGIANQLTNILRDVGEDAWIGRIYLPQDELEQFGLSDQDVFARKVTDNWRE
FMKEQIARARFYYNLVEQGISRLDKASHWPLWSSLLLYQNILDAIEENDYDNLTKRAYVG
KTKKLIILSHAYKKAQSVPSSIFH
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgtgttcaacattttcagtttctacgaacccttgcagttatggagcaaataatgccaga
ttcttgcattcaaaatcctttgttacaagaacaagagctcaagggattagagcccacaaa
tgctcgagcagtggtgccattcctcggccattgatcaaagaattcattcctcgtactggt
cttcgtgtgcatgaaattgtcgagaggcagtcgcaggctaacaacttaaccaagcaagat
gcctgtagaagggtagagatgaatctgacattacttgaagaagcgtataaaagaagcaga
aacatctgtgcagaatatgctcggacgtattatctagcttctttgctgatgacagaggag
cgacagaaagccatatgggcaatttatgcttggggcactaggatagatgaaatggtggat
ggcccaaatgctgtctacatgggcacttctcttcttgataggtgggaggaaagactgcaa
gacatcttcgacggccgcccctatgacatacttgatgctgcacttactgatacagtttcc
aatttctgtctagatatcaagcctttcaaggagatgatcgagggtatgagaatggatacc
tggaaaagtcggtataagaactttcaagagctctacctttactgctactatgttgctgga
acagctggaatcatgactgttccagtaatggggattgcacctgaatcttctgtttctact
aaaagcatttataatgcagcaattcattttggtattgcaaatcaactcacaaacattctc
agagatgtgggggaggatgcatggatagggagaatttatcttccacaagatgagcttgaa
caatttggtctatccgaccaggatgttttcgcaagaaaggtcactgacaattggagagag
ttcatgaaggagcagattgcaagggcaagattctattacaaccttgtagagcaagggatc
tcgcgtcttgacaaggctagccattggccgctatggtcatccttgctcttataccaaaac
atcttggatgcaattgaagaaaatgattacgataacctcacaaagcgagcttatgttgga
aagactaagaaacttatcatattgtctcatgcatacaaaaaagctcaatcagttccaagc
tcaatatttcactaa
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