KEGG   Populus trichocarpa (black cottonwood): 7465265
Entry
7465265           CDS       T01077                                 
Name
(RefSeq) signal recognition particle 54 kDa protein, chloroplastic
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
pop  Populus trichocarpa (black cottonwood)
Pathway
pop03060  Protein export
Brite
KEGG Orthology (KO) [BR:pop00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    7465265
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pop02044]
    7465265
Enzymes [BR:pop01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     7465265
Secretion system [BR:pop02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   7465265
  Eukaryotic Sec-SRP protein
   7465265
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N Zeta_toxin CbiA AAA_22 APS_kinase CLP1_P AAA_17 AAA_16 ArsA_ATPase ParA AAA_30 AAA_18 cobW NTPase_1 nSTAND3 6PF2K Thymidylate_kin AAA_31 KAP_NTPase AAA_24 AAA_33 AAA KTI12 ATP_bind_1 AAA_19 AAA_14 ResIII AAA_25 HyaE BRCC36_C TsaE
Other DBs
NCBI-GeneID: 7465265
NCBI-ProteinID: XP_024442953
LinkDB
Position
16:5961913..5971426
AA seq 576 aa
MEAVQLSTVASRHFSTPSLSKNNKTLSYYSSCPGCSTKSFCSSWTGSSNNVTSLSSRNSF
TKEMWRWVTCKSVVTFRREMGGGVVKAEMFGQLTSGLESAWNKLKGEEVLTKENIVEPMR
DIRRALLEADVSLPVVRRFVQSVSDQAVGVGLVRGVKPDQQLVKIVHDELVKLMGGEVSE
LVFAKSAPTVILLAGLQGVGKTTVCAKLANYLKKQGKSCMLIAGDVYRPAAIDQLVILGE
QVGVPVYTEGTDVKPSEIARKGLSEAKKKNIDVVIVDTAGRLQIDKGMMDELKDVKLILN
PTEVLLVVDAMTGQEAAALVTTFNLEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLV
GRGERMEDLEPFYPNRMAGRILGMGDVLSFVEKAQEVMRQEDAEELQKKIMSANFDFNDF
LKQTRAVAKMGSMTRVIGMIPGMAKVTPGQVREAEKNLKIMEAMIEVMTPEEREKPELLA
ESPERRKRVAQASGKTEHQVSQLVAQLFQMRVRMKNLMGVMEGGSIPSLSNLEDALKTEQ
KAPPGTARRRRKTESSKRFVDSVSSRPGPHGFGSSN
NT seq 1731 nt   +upstreamnt  +downstreamnt
atggaggccgtacagttatcgaccgttgcctcccgccatttctctactccttctctctcg
aaaaacaacaagactctctcttactattcaagctgtccaggatgttcaactaaatctttt
tgttcttcgtggactggctcaagcaataatgtcacttcgctttcctcaagaaattcattc
actaaagagatgtggaggtgggtgacttgcaagagtgttgttacttttagaagagaaatg
ggaggtggtgtggtaaaagcagaaatgtttggtcagttaactagtggtctcgaatctgct
tggaacaagctcaaaggagaagaggttttgaccaaggagaatattgtggagccaatgagg
gatattagaagagctctactggaagctgatgtaagccttcctgtggttcgaaggtttgtt
caatcagtcagtgaccaagctgttggtgttggcctggttagaggagtgaaacctgatcag
caattagtcaagattgtgcacgatgagcttgtgaaattgatgggtggagaggtatctgaa
ttggtctttgcaaaatctgctcccactgtaatattattggctggcctacaaggagttggg
aagacaactgtttgtgcaaagttagctaattaccttaagaaacaggggaagtcttgcatg
cttattgcgggagatgtctacagacctgctgccattgatcaacttgttattttgggtgaa
caggtaggtgtgcctgtttatacagaaggaactgatgttaaaccttcagaaatagctagg
aaaggtttatcagaggccaaaaagaagaacatagatgtggtcatagtagacactgctgga
aggcttcagatagacaaagggatgatggatgagctgaaagacgttaaactgatattgaat
ccaacagaagttttgcttgttgtggatgcaatgactgggcaagaagctgcagctctggtt
acaacattcaatcttgaaattggaattacgggtgccattttgaccaagctagatggggat
tctagaggtggtgcagctcttagtgtcaaagaggtatcaggaaagccaatcaagcttgta
ggacggggagagcgaatggaggatcttgaacctttctaccccaatcgcatggctggacgc
atcttaggaatgggagatgttctgtcttttgttgagaaggctcaagaagttatgcgccaa
gaagatgctgaagaattgcagaagaagattatgagtgccaattttgacttcaatgatttc
ctaaagcaaactcgtgctgttgctaagatgggttccatgactcgtgtcatagggatgatc
ccaggaatggccaaggttactcctggacaagttcgagaagcagagaagaatttaaagata
atggaagcaatgattgaagtgatgactcctgaggagagagagaagccagaattgttagca
gaatctcctgaaaggaggaaaagagttgcccaggcttctggaaagacagagcatcaggtg
agccaacttgttgcccaactcttccaaatgcgtgttcgtatgaagaacctaatgggtgtg
atggagggtggatctattccttccctgagcaatcttgaggatgcactaaaaaccgaacag
aaggctcctcccggcactgcaaggaggaggagaaaaacagaatcaagcaagcggtttgtt
gactcagtatcatcaaggccgggtccccatggttttgggtctagcaattag

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