Populus trichocarpa (black cottonwood): 7465541
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Entry
7465541 CDS
T01077
Name
(RefSeq) probable starch synthase 4, chloroplastic/amyloplastic isoform X1
KO
K00703
starch synthase [EC:
2.4.1.21
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00500
Starch and sucrose metabolism
pop01100
Metabolic pathways
pop01110
Biosynthesis of secondary metabolites
Module
pop_M00854
Glycogen biosynthesis, glucose-1P => glycogen/starch
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
7465541
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pop01003
]
7465541
Enzymes [BR:
pop01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.21 starch synthase (glycosyl-transferring)
7465541
Glycosyltransferases [BR:
pop01003
]
Polysaccharide
Storage polysaccharide
7465541
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_5
Glyco_transf_4
Glyco_trans_4_4
Motif
Other DBs
NCBI-GeneID:
7465541
NCBI-ProteinID:
XP_024461574
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Position
7:complement(740759..751726)
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AA seq
727 aa
AA seq
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MKMESVINSTILSLACFPKSNPSIHHQKTVKARRTVCCSLSSSSSKNSNSEGDANGLLKE
EEEEKYNDIWLLFKEAQQNILYLNKLRLVAVEELNKANREKQLLLDKIQQLEAVNKLALS
EGNEQSLWRELLLRIDSMVLTGLIDSAEASGMRKAVMGNKFSVALVFFDIRQKTDAELLA
QLRHFSVGSRKNGFHIIQICTEMEPLVSVGSLSSYVTGLSKALQKKGHIVEVILPKYACL
DLTEMQGLREIEAELYSYFNGQLHGNRIWTGIVHGIGVTLIQPLYYSSFFDRERVYGYSD
DFERFTYFSRASLDYIAKSGKQPDVLHIHNWETAIVGPLFWDIFVKQGLGGTRVLLTCHG
FDSQCLEQPDKLALCGLDPARLHRPDRLQDHTMTHLVNILKGGLVYSNKVVMVQSIYSKE
RIINSFSHGLEPTLAIHKDKLLVSPCGFDNSTWDPSKDKFLPKNYSADDLKGKSICKVAL
QQQLGLSKNSSTVLVGCISTESLDFDLNNQKAVWNATPKSVQVCTCFWDLYFFEENTGLS
AEYRRNSLLAGEMRVLKKVTRTVILNFPWQPHESFIFMGSKATSADGALEYLKKELKDET
VRFINKYDEALLHLIFAGSDIILCQSFHDPLLQVPLKALKYGAAPVAVTSNENKFRHFVD
REQETTRFSRFISSTFGYLSLSQAVDEIKNSPSKWKQKMVDAMAKDFSWNAECCDVHVSA
YTALKSL
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatggagtctgtaataaactctaccatcctctcactcgcttgcttcccaaaatcc
aacccatcaatccaccaccaaaaaaccgtcaaagctcgacgaacagtttgctgctccctc
agcagcagcagcagcaagaatagtaacagtgaaggagacgctaatggcttacttaaagaa
gaggaggaagagaaatataatgacatttggctgctttttaaagaagctcagcagaatatt
ctttacttaaacaaactacgccttgtggctgttgaagagctcaataaagcaaacagagag
aagcagttgttgcttgataaaatccagcaattggaggctgtcaacaaattagcgctttct
gaaggaaatgagcaatcattgtggcgggaattgctgcttcggattgactcaatggtccta
actggcttgattgattctgctgaggcttctggtatgagaaaagcagtcatgggtaacaag
tttagtgtagctcttgttttcttcgacatccggcagaaaactgatgctgagcttctggca
caactccgtcacttctccgttggaagcagaaagaatggttttcacataatccaaatttgc
actgaaatggaaccactggtatcggttggatccttgtcatcatatgtgacaggcttatca
aaggcactgcagaaaaaaggacacatagtggaggttattttgccaaagtatgcatgtctg
gacctcactgaaatgcaaggactgcgagaaattgaggcagagttgtattcatattttaat
ggtcaattgcatggaaacagaatttggactggcatcgtccatggcattggagtcactctc
attcaacctttgtactattcatcctttttcgatcgtgaaagggtatatggctactcagat
gactttgaacgatttacctatttctctcgtgcttcattggattatatagcaaaatctgga
aagcagcctgatgtgttgcatatacacaattgggaaactgctatcgtcgggccactcttt
tgggatatttttgttaaacaggggcttggaggtaccagagtattgttgacatgccatggc
tttgactcacaatgccttgagcaacctgataagctagcactatgcggacttgatcctgct
agacttcaccgtcctgaccgtttacaagatcacactatgacacatcttgtcaatattctg
aagggtggacttgtgtactcaaataaagttgttatggtgcaatctatttattcaaaagaa
aggatcattaatagtttcagtcacggattagaaccgaccttagcgattcacaaggacaag
ttgcttgtttctccttgtgggtttgataactccacctgggatccttcaaaggacaaattt
cttccaaaaaattatagtgcagatgacctaaaggggaaatccatttgcaaagttgcattg
cagcagcagctggggttatccaaaaattcatcaactgttcttgtaggatgcatctccaca
gaatctttggattttgatctgaataaccagaaggcagtttggaatgctacaccaaagagt
gtccaggtttgtacatgtttttgggatctttatttctttgaagagaatacagggcttagt
gctgaatatcggagaaactccttactagctggtgaaatgagggtacttaagaaagtgaca
agaacagtgattctcaattttccttggcagccgcatgaatcattcatcttcatgggaagc
aaagcgacgagtgcagatggagcactggaatatcttaagaaagaactaaaggatgaaact
gtgagattcataaacaaatatgatgaggctctattgcatctgatctttgcaggttcagac
ataatcttgtgccaatcttttcatgatcctctactccaagtgcctctgaaagctttgaaa
tatggagcagctccggttgcagtaacatccaatgagaacaaattcagacattttgtagat
cgtgaacaagagaccactagattttcacggttcattagctctacctttggatatttgtct
ttgagccaggctgtagatgaaattaagaacagcccatcaaaatggaagcagaagatggta
gatgccatggctaaggacttctcatggaatgcagagtgctgtgacgttcatgtttctgca
tacacggccctaaaaagcttgtga
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