Populus trichocarpa (black cottonwood): 7470582
Help
Entry
7470582 CDS
T01077
Name
(RefSeq) protein PAF1 homolog
KO
K15174
RNA polymerase II-associated factor 1
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pop03021
]
7470582
Transcription machinery [BR:
pop03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
7470582
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Paf1
Motif
Other DBs
NCBI-GeneID:
7470582
NCBI-ProteinID:
XP_024443464
LinkDB
All DBs
Position
1:17266227..17273333
Genome browser
AA seq
676 aa
AA seq
DB search
MASYRPFPAPPPPPPPPQQPPQPQPQPPPPPQQLQRPNQYPQNYNPQLAPPPPPQNYQNF
SQHYPQPPRPAPPPPLPHQQYPYQPPPPPESSYPPPPPPAPQQQRPPPPNLYYPPSHYGH
QPMQHPPPPPPPPPSSPPPSSSAPPPPPPSSPPPAPPAVERDKGVYRESREYDNSNHGKH
HHQQHKPQLPPVGKKANGHSGRAETDQERRLRKKREFDKQRQEEKHRQLLKESQNPALPK
NQMMSSQKGHGSIAGSRLGDRRATPLLGAERTENRLKKPTTFLCKLKFRNELPDPSAQPK
LMPLKRDKDRYTKYTITSLEKMYKPQLYVEPDLGIPLDLLDLSVYNPPSIRPPLAPEDEE
LLRDDETVAPVKRDGIRRKERPTDKGVSWLVKTQYISPLSMESTKSLNKNQAKELREMKG
GRNLLDNLNNRERQIKEIQASFEANKLPPVHATNKNLHPIEVLPLLPDFDRYEDKFVTAT
FDGAPTVDAENYNKFDSSDREAYESRAIMKACVATGSDPTNPEKFLAYMVPSPDEMSKDM
HDESEDISYSWIRGYHWDIRGDDANDPTTFLVSFDEAEARYLPLPTKINLTKRRAREGRS
GDEIEHFSVPSRVTVRKRAIAATIEQRNLGAASSSRGNDSRMGGRFEDDDGLGRLQRVAQ
DEDLEQSSEAEDEMSE
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atggcctcctataggccattccctgcaccacctccacctccacctccaccacagcaacca
ccacaaccacaaccacaaccaccgccaccaccacaacaactgcaaagaccaaatcagtat
cctcaaaactacaatcctcaattggccccaccaccaccaccacaaaactatcagaatttc
tcgcaacattaccctcagccgccccgccctgctccacctcctccattgcctcaccaacaa
tacccttatcagccaccccctcctcctgaatcctcatacccacctcctcctccaccagca
ccacaacagcaacggccaccaccacctaatttgtactacccgccttcacattacggtcat
caaccaatgcagcatccacctccacctccaccccctcccccttcatctcctccacctagt
tcttcagctccacccccaccacctcccagctccccacccccagcccctcctgctgttgaa
agagataaaggggtatatcgggagagtagggaatatgataattccaatcatgggaaacat
catcatcaacaacacaagccacagcttccacctgtgggaaagaaggcgaatgggcactct
gggagagcggagacagatcaggagaggaggttgaggaagaagagagagtttgacaagcaa
aggcaggaggagaagcatagacagctgttgaaagagtcacagaacccagctctgccgaag
aaccagatgatgtcttctcagaaagggcatggttccattgctggttcacgattgggggat
aggagggccactccattgttgggtgcggagaggactgagaataggttgaagaagccaacg
accttcttgtgcaagttgaaattccggaatgaacttcctgatccgagtgcccaaccaaag
ctgatgcctttaaagagagataaagatcgatatacaaaatacacaatcacatctttggag
aaaatgtataaacctcaactatatgttgagccagatcttggaatacctctggacttgctt
gatctcagtgtatacaatcctcctagtattagaccacctcttgctcctgaagatgaggaa
ttgttgcgtgacgatgagacagtcgcccctgtaaaaagagatggcataagaagaaaagaa
cggccaacagataaaggtgtttcttggctggttaagacacagtatatatctcctctgagc
atggagtcaaccaaatctctgaacaaaaaccaagctaaagaactgagagaaatgaaggga
ggtcggaatcttttggacaatctcaataacagggagagacagatcaaggaaattcaagca
tcttttgaggcaaacaagttacctcctgtgcacgcaactaataaaaacttacatccaatc
gaggttctgcctctgctgcctgattttgatcggtatgaagataaatttgtcacagcaaca
tttgatggtgctcctacagttgatgcagaaaattacaacaagttcgattcatctgaccgt
gaagcctatgaatcacgggctattatgaaagcttgtgtggcaactggttcagatccaact
aacccagaaaaatttttggcatacatggtaccttctcctgatgagatgtcgaaggatatg
catgatgagagtgaggatatctcatattcttggattcgcgggtatcattgggatatacgg
ggggatgatgccaatgaccctacaacattccttgtttcatttgatgaggctgaagctcgc
tacttgcctcttcccacaaagattaatttaacaaagaggagagccagagagggaagatca
ggtgacgagattgaacatttttctgtaccctcaagagtaactgtgaggaaaagagccatt
gctgctacaattgaacagaggaatttgggggctgcttcaagttcaaggggtaatgattca
aggatgggaggaaggtttgaggatgatgatggccttggaagattacagagggttgctcaa
gatgaggaccttgaacagtctagtgaggcagaagatgagatgtctgaatga
DBGET
integrated database retrieval system
