Populus trichocarpa (black cottonwood): 7476885
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Entry
7476885 CDS
T01077
Name
(RefSeq) U3 small nucleolar RNA-associated protein 18 homolog isoform X1
KO
K14553
U3 small nucleolar RNA-associated protein 18
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
7476885
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pop03009
]
7476885
Ribosome biogenesis [BR:
pop03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
7476885
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Ortholog
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GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
Motif
Other DBs
NCBI-GeneID:
7476885
NCBI-ProteinID:
XP_002306819
UniProt:
B9H8H4
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Position
5:22129621..22132347
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AA seq
585 aa
AA seq
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MSLISQNVGSKNRVKRSNADEPAFLGVNNSNADADEPAFLGVNNSNADEPAFLGVHKDDE
GRIESDLVLSKTKKKRKERDELLEKQLEIEEGKEMKKLENFLFGSLYSPVEFGKEEEKKD
SLSFFLDRSVGSVEPGHEEDVELMKESDIEEERKAVWLDEEEEKTKVNIAKVNRLRKLRK
DEDESLISGSQYVSRLRAQHAKMNPGTDWARLDSQSRNDGLSDDELSDEENGIVLARGYK
NDNAYDDILRTNEDLVVKSRAKLLPGLLEYSRLVDANAEDPSNGPINSVQFHQNAQLLLA
AGLDRRLRFFQIDGKRNTKIQSIFIDDCPIRKASFLPDGSKVIIAGRRKFFYSFDLVKAK
VDKIGPLVGREEKSLEVFEVSPDSSMIAFVGNEGYILLVSSKTKELVGTLKMNGTVRSLA
FADDGQQLLSHGGDGQVYHWDLRTRACIHKAVDEGCIHGTALCTSPTRNLFAAGSDSGIV
NIYNRDEFLGGKKKPIKTIENLTTKVDFLKFNNDAQILAVCSHMKKNSLKLIHVPSFTVF
SNWPPANSAIHYPRCLDFSPGGGFMAMGNAAGKVLLYKLHHYDHA
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgagtttgatatctcaaaatgttggctcaaaaaatagagttaagcgctcaaatgctgat
gagcctgcttttttgggggtgaataattcaaatgctgatgctgatgagcctgcttttttg
ggggtgaataattcaaatgctgatgagcctgcttttttgggggtgcataaagatgatgag
ggtagaatagaatctgatttggtcttgtcaaagacaaagaagaaacgtaaagaaagggat
gagctgctagagaagcagttggaaattgaagaaggaaaggaaatgaagaagttggagaac
tttttgtttggttccctatactctcctgttgaattcgggaaagaggaagagaaaaaggat
tctctttcgttctttttggaccggtctgtgggcagtgtagagcctggtcatgaagaagat
gtggaattgatgaaggaaagcgatatagaagaggaacggaaagctgtgtggcttgatgag
gaagaggagaagaccaaagttaacattgctaaggttaatagattaaggaaactgaggaag
gatgaggatgagagtttgatttctggttctcagtatgtttcaaggttaagggctcagcat
gctaagatgaatccaggcactgattgggccagacttgattcgcagtctagaaatgatggt
ttgtccgatgatgaactgtccgatgaagaaaatggcatagtgttggctcgtggttacaag
aatgataatgcttatgatgatattctccgaactaatgaagatcttgtggtgaagagcaga
gcaaaactgttgcctggtcttcttgagtactcaagacttgtggatgcaaatgctgaggat
ccttcaaatggtccaataaattcggttcagttccatcagaatgctcagttgttacttgcg
gctggattagaccggaggcttaggttttttcagattgatggtaaacggaataccaaaata
caaagtatatttattgatgattgccccattagaaaggcatcatttttacctgatggttct
aaggttatcatagctggaagaagaaagttcttttatagctttgatttagtaaaagctaaa
gttgataaaattggcccacttgttggaagggaggagaagagcttggaagtttttgaggtt
tcccctgattctagtatgattgcttttgtgggcaatgaaggttatatccttctggtgtca
tccaaaacaaaggaactagttgggactctaaagatgaatggaactgttcgttcattagct
tttgctgacgatgggcagcaattactgagccatggaggtgatgggcaggtctaccactgg
gacttgaggacaagggcttgcatccacaaggctgttgatgagggttgtattcatggcaca
gctctctgcacttcaccaacaagaaatttgtttgctgctggttcagacagtggtatagta
aatatctacaatagagatgagtttttaggtgggaagaaaaaacctatcaagacaatcgag
aatttgaccaccaaggtggactttttgaaatttaataatgatgctcaaatattggccgtt
tgttcccacatgaagaagaacagtttaaagttgatacatgtcccatcatttactgtcttt
tctaactggcctccagcaaacagcgccatacattatccccgttgtttggatttcagtcct
ggtggaggtttcatggccatgggaaatgctgccggaaaagttctgttatacaagttgcat
cattatgaccatgcatag
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