Populus trichocarpa (black cottonwood): 7479258
Help
Entry
7479258 CDS
T01077
Name
(RefSeq) elongation factor Tu, chloroplastic
KO
K02358
elongation factor Tu
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
7479258
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
pop03012
]
7479258
03029 Mitochondrial biogenesis [BR:
pop03029
]
7479258
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pop04147
]
7479258
Translation factors [BR:
pop03012
]
Eukaryotic type
Elongation factors
7479258
Prokaryotic type
7479258
Mitochondrial biogenesis [BR:
pop03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Mitochondrial translation factors
7479258
Exosome [BR:
pop04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
7479258
Exosomal proteins of breast cancer cells
7479258
Exosomal proteins of colorectal cancer cells
7479258
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
cobW
DAP_epimerase
RsgA_GTPase
Motif
Other DBs
NCBI-GeneID:
7479258
NCBI-ProteinID:
XP_002304468
UniProt:
B9GW65
LinkDB
All DBs
Position
3:complement(14263100..14264904)
Genome browser
AA seq
483 aa
AA seq
DB search
MAISASTTTFTSTNLLYPHHSTTTSTTSTPTFSLTPTSKLPSKSILSSSFLPTLTPTSSS
SPLTTTRHRFLTVRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALASMGGSAPKK
YDEIDAAPEERARGITINTATVEYETESRHYAHVDCPGHADYVKNMITGAAQMDGAILVV
SGADGPMPQTKEHILLAKQVGVPNMVVFLNKQDQVDDEELLQLVELEVRELLSSYEFPGD
DIPIISGSALLALEALMENPAIKRGENQWVDKIYELMDNVDNYIPIPQRQTDLPFLLAVE
DVFSITGRGTVATGRVERGTIKTGDTVDIVGLRETRNVTVTGVEMFQKILDEALAGDNVG
LLLRGVQKADIQRGMVLSKPGSITPHTKFEAIVYVLKKEEGGRHSPFFAGYRPQFYMRTT
DVTGRVATIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQS
IIE
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atggctatttccgcctcaacaactactttcacctccacaaacctcctctacccccaccac
tcaaccaccacatccaccacatccacccctactttctccctaacacccacctcgaaactc
ccctcaaaatccatcctttcgtcttcttttctccccaccctcactcccacctcctcatcc
tcccctctcaccaccacccgccaccgctttctcactgtccgtgcagctagagggaagttc
gaaagaaagaaaccccatgtcaacattggcacaataggccatgtagaccacggcaaaaca
actctcaccgctgctctaaccatggctttagcctcaatgggcggcagtgcaccaaaaaaa
tacgatgaaatcgatgctgcacctgaagaacgcgctagaggaatcacaattaacactgct
actgttgaatatgagacggaatctcgccattatgctcatgtcgattgtcctggtcatgct
gattatgttaagaacatgattactggtgctgctcaaatggatggagctattcttgttgtg
tctggcgctgatggtccaatgccacaaacaaaagagcatatcttgttggcaaagcaagtt
ggggttccaaatatggttgtgtttttgaataaacaagatcaagttgatgatgaggagctg
ttgcagttggtagagttggaggtaagagaattgttgtctagttatgagtttcctggtgat
gatattccaattatttctggttctgccttgttagctttagaggctttgatggaaaatccg
gctattaagagaggagagaatcaatgggttgataaaatatatgaacttatggataatgtt
gataattatataccaattcctcaaaggcaaactgatttgccatttttacttgccgttgag
gatgttttttctattactggtcgtgggactgtagctaccgggagggttgagagagggaca
attaaaactggggatacagtagatattgtggggttgagggagactaggaatgtaacagtt
actggtgtggaaatgtttcaaaagatattggatgaagcattggcaggtgataatgttggg
ttgttattgagaggtgttcaaaaggctgatattcagagagggatggttttgtcgaagcca
gggtcaattactccacataccaagtttgaggcgattgtttatgttttgaagaaggaagaa
ggtggtaggcattctcccttctttgctgggtataggcctcaattttatatgaggacaact
gatgttacagggagggtggctacaattatgaatgataaggatgaggagtcgaagatggtt
atgcctggggatcgtgtgaagatggtggtggaacttattatgcctgtggcttgtgagcaa
ggtatgaggtttgctatcagagaaggagggaagactgttggagccggtgttatccagtcc
attattgagtag
DBGET
integrated database retrieval system
