Pseudomonas oryzihabitans: APT59_17225
Help
Entry
APT59_17225 CDS
T04267
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
por
Pseudomonas oryzihabitans
Pathway
por00470
D-Amino acid metabolism
por00550
Peptidoglycan biosynthesis
por01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
por00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
APT59_17225 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
APT59_17225 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
por01011
]
APT59_17225 (murD)
Enzymes [BR:
por01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
APT59_17225 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
por01011
]
Precursor biosynthesis
Amino acid ligase
APT59_17225 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
MurD-like_N
Mur_ligase_C
DNAPolymera_Pol
Motif
Other DBs
NCBI-ProteinID:
ALZ86904
UniProt:
A0A0U4W626
LinkDB
All DBs
Position
complement(3777640..3778929)
Genome browser
AA seq
429 aa
AA seq
DB search
MSLVRFLARRGVPFAVADTREQPPELETLRTQYPGIEVCCGELDVDFLARAAELYVSPGL
ALETPALQQAAARGVRLSGDIDLFVRHARAPLVAITGSNAKSTVTTLVGDMARRAGKRVA
VGGNLGTPALDLLADDVELYVLELSSFQLETCERLDAEVATVLNLSEDHMDRYTGMPAYH
QAKHRIFRGARQVVVNRDDALSRPLIGEGVPCLTFGLGRPDFRAFGIREEEGRRYLALAF
DNLLDVEELKIRGTHNHSNALAALALGQAAGLPLAPMLEALRAFPGLEHRCQWVGEVAGV
SYYNDSKATNVGAALAAVEGLGDDIVGQLVLIAGGDGKGADFSALREPIGRHCRAVVLLG
RDAARIAEILPPAVKQVHVATLEEAVRESRSLAQPGDAVLLSPACASLDMFRNFEERGRL
FAQAVEGLS
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctggtgcgctttctcgcgcgccggggcgtgccctttgccgtggccgacacgcgg
gaacagccgccggaactggagaccctgagaacccagtaccccgggatcgaggtgtgctgc
ggtgagctggacgtcgacttcctcgcccgggctgccgagctctatgtgagtccgggcctg
gcgctggaaacgccggccctgcaacaggccgctgcccgtggcgtgcggctgtccggcgac
atcgatctcttcgtgcgccatgcccgcgcgcccctcgttgccatcaccggttccaacgcc
aagagcaccgtcaccaccctggtcggtgacatggcccggcgcgccggcaagcgcgtcgcc
gtgggtggcaatctgggcactccggcgctggatctgctggccgatgacgtcgagctctat
gtgctggagctgtcgagcttccagctggagacctgcgagcggctggacgccgaggtggcc
acggtgctcaacctcagcgaagaccacatggatcgctataccggcatgccggcctatcac
caggccaagcaccgcatcttccggggcgcccgccaggtggtggtcaatcgcgacgatgcg
ctgtcgcggccactgatcggcgagggcgtgccctgcctgacctttggcctggggcgtccg
gatttccgtgccttcggcattcgcgaggaggagggtcgccgctatctggcgctggccttc
gacaacctgctggatgtcgaggaactcaagatccgtggcactcacaatcacagtaatgcg
ctggccgcgctcgcgctcggtcaggccgcagggttgccgctggcgcccatgctggaggcg
ctgcgtgcctttcctggtctggagcaccgctgccagtgggtgggtgaggtcgcaggcgtc
agctactacaacgattccaaggcgaccaatgtcggcgctgccctggcggccgtcgaaggc
ctgggcgacgacatcgtcggccaactggtgctgatcgccggtggcgatggcaagggcgcc
gacttcagcgccttgcgcgaacccatcggtcgccattgccgcgccgtggtactgctggga
cgcgatgccgcgcggatcgccgagatactgcctccggccgtcaagcaggtgcacgttgct
acgctggaggaagccgtgcgcgaaagccgcagcctggcccagccaggcgatgccgtgctg
ttgtcgccggcctgtgccagtctcgacatgttccgcaacttcgaggaacgcggacggctg
ttcgcccaggccgtggagggcttgtcatga
DBGET
integrated database retrieval system
