KEGG   Pseudomonas oryziphila: EJA05_21370
Entry
EJA05_21370       CDS       T07791                                 
Symbol
traD
Name
(GenBank) type IV conjugative transfer system coupling protein TraD
  KO
K12071  conjugal transfer pilus assembly protein TraD
Organism
pory  Pseudomonas oryziphila
Brite
KEGG Orthology (KO) [BR:pory00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pory02044]
    EJA05_21370 (traD)
Secretion system [BR:pory02044]
 Type IV secretion system
  Conjugal transfer pilus assembly protein
   EJA05_21370 (traD)
SSDB
Motif
Pfam: TraG-D_C TrwB_AAD_bind
Other DBs
NCBI-ProteinID: AZL70114
UniProt: A0A3Q8U334
LinkDB
Position
4569690..4571909
AA seq 739 aa
MMATYTLESLLRPPVELFTTAVCYVAAALCVSAPWAFALTPLFGIVAALGFIYLGTVRLL
QARRVLRYQANLRRLPHYTMTSAEMPISNERLFIGRGFRWTQKHTQRLADTYLPQYAGYV
EPTKLYIQARWLEERLEFAPFPLKAITKLTGWDSSWNPARPLPPVGGLPRLHGIEPDEQN
VSLPLGERVGHTLVLGTTRVGKTRLAEVFITQDIRRTHRRRPRAHMGRRNQAPHRWSRRR
QIEQQPDHEVVIVFDPKGDADLLKRMYVECKRAGRLDEFYVFHLGWPDISARYNAIGRFG
RISEVATRIAGQLSGEGNSAAFREFAWRFVNIIAQSLVALGRRPDYEQIRRHVINIDELF
IEYAQKYFAEHDPKAWQTIVELEGKIDRKNLSFAMKDRPLRVVAIDMYLTQKRINDSVMD
GLRSAVRYDKTYFDKIVASLLPLLEKLTTGRIAELLAPDYLDLADERPIFDWMQVIRKRA
VVYVGLDALSDTEVSAAVGNSMFSDLVSVAGHIYKHGIDDGLPGHMAGGKVRINLHADEF
NELIGDEFIPMVNKAGGAGIQVTAYTQTMSDIEAKIGSKAKAGQVIGNFNNLFMLRVRET
ATAELLTNQLPKVQIYNSTPASSANDSVNGKTAFTSSSHDQVQLASVPMIEPAHVVGLPK
GQAFALIEGGNLWKIRMPLPANDPDDALPGNLQELAAGMRRSAASSTDWWEAPGYQELKT
ALPDDLVEDFRQVSTDDAA
NT seq 2220 nt   +upstreamnt  +downstreamnt
gtgatggcgacctacacccttgaatcgctgctacggcctccggtggagctgttcaccacc
gcagtttgctacgtggcggccgcgctctgcgtgagcgcgccgtgggcattcgccctgaca
ccactgttcggaattgtcgctgccctgggcttcatctatctcggcactgtgcggctgtta
caggcccgacgagttcttcgctaccaggctaacctgcgtcggcttccccactacaccatg
accagtgctgaaatgccgatcagcaacgagcgcctgttcattggccggggattccgttgg
acgcagaagcacacgcagcgcttggccgacacctacctcccccagtacgccggttacgtc
gagcccacgaagctttacatacaagcacgctggctggaggaacgcttggagtttgcaccc
ttccccttgaaggcgatcactaagctaactggctgggattccagctggaaccctgcccgg
cctctgcctccggtaggtggcctgcccagactgcatgggattgagcccgatgagcagaat
gtcagcctgcccctgggcgagcgcgttggccacaccctggtgctgggaaccactcgtgta
ggtaagacgcgattggcagaggtcttcatcacccaggacatccgccgcacacatcgccgt
aggccgcgcgctcacatggggcgcaggaaccaggccccgcatcgctggagccgacgcagg
cagattgagcaacagcccgaccacgaggtggtgatcgtcttcgatcccaagggcgatgcc
gacctgctcaaacgcatgtacgtcgagtgcaaacgggctgggcgcctcgacgagttctac
gtattccacctggggtggccggacatctccgcgcgctacaacgccatcggccgctttggc
cggatcagcgaagtcgccacccgcattgctggccagctttctggtgagggcaactctgcc
gcattccgtgagttcgcctggcgattcgtcaacatcattgcgcagtctttggtcgccctc
ggccgccgcccggactatgagcagatccgccggcacgtcatcaacatcgacgagctcttt
atcgagtacgcacaaaaatacttcgcggagcacgaccccaaggcctggcagaccatcgtc
gagctggaagggaagattgatcgcaagaacctgtcgttcgcgatgaaagatcgcccgctt
cgggtggtggcgatcgacatgtacctgacccagaagcgcatcaacgactcggtcatggac
ggcctgcgcagcgctgtgcgctacgacaagacctatttcgacaagatcgtcgcatcgttg
ctcccgctcctggagaaactcaccacggggcggattgctgaactgctcgcccccgactac
ctggatctcgctgacgagcgaccgattttcgactggatgcaggtaatccgaaagcgcgcc
gtggtctatgtcggcctcgatgcattgtccgacacagaagtcagcgcggccgtgggtaac
tcgatgttcagcgacttggtctcggtcgcggggcacatctataagcatggcatcgacgac
ggcctgccaggacatatggccgggggcaaagtgcgcatcaacctccacgctgacgagttc
aacgagctgatcggggacgagttcatccctatggtgaacaaggccggtggcgccggcatc
caggtcaccgcctacacccagacgatgagcgacatcgaggcgaagattggctcgaaggca
aaggctggccaggtgatcggtaacttcaacaacctgttcatgttgcgggtccgtgagacc
gcaactgctgagctgctgaccaaccagttgcccaaggtgcagatctacaacagcacgccg
gcaagcagcgcgaacgactcggttaacggcaaaaccgcgttcacctcgagctcgcatgac
caggtgcagctggcgagtgtgccaatgattgagccagctcacgtcgtcggcttgcccaag
ggccaggccttcgcactgatcgagggcgggaacctctggaagatccgcatgccgcttcct
gcgaacgacccggacgacgccctgcccggcaacctgcaggagctggccgccggcatgcgg
cgatctgcggcgtcctcgaccgactggtgggaagcacccggctaccaggagctgaagacc
gccctgcccgacgacctagtcgaggatttccgccaggtgtccaccgatgacgcagcgtga

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