Porphyrobacter sp. YT40: E2E27_06915
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Entry
E2E27_06915 CDS
T06153
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
pot
Porphyrobacter sp. YT40
Brite
KEGG Orthology (KO) [BR:
pot00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pot03021
]
E2E27_06915 (rpoH)
Transcription machinery [BR:
pot03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
E2E27_06915 (rpoH)
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
DUF5817
DUF1870
Sigma70_r4_2
HTH_11
Caudo_TAP
Motif
Other DBs
NCBI-ProteinID:
QDH36098
LinkDB
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Position
complement(1470453..1471340)
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AA seq
295 aa
AA seq
DB search
MAVPALSGEQSLNRYLSEIRKFPVLTAEQEYMLAKRYQEHEDPEAAAQLVSSHLRLVAKI
AMGYRGYGLPVADLISEGNVGLMQGVKKFEPDRGFRLATYAMWWIKASMQEFILRSWSLV
KMGTTAAQKKLFFNLRRMKKQLEAYEDTDLSPEDVTKIATDLGVPEQEVINMNRRMMMGG
DGSLNTPMRGGEEGSGEWQDWLTDDRPLQDETVAEAEESQMRMEMLSEAMNSLNERERHI
LTERRLTEKPQTLEELSQAYDVSRERIRQIEVRAFEKLQKAMQRIAGERLLPGVA
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atggcggtcccggcgttgagcggtgagcagagcctcaaccgctacctgtcggaaatccgc
aaattcccggtgctgacggcggagcaggaatacatgctcgccaagcgctatcaggaacat
gaagacccggaagctgccgcgcagctcgtgtccagccacctgcggctcgtcgcgaagatc
gcgatgggataccgcggctatggcctgcccgtggccgacctgatctccgaaggcaacgtg
ggtctgatgcagggcgtcaagaagttcgaacccgatcgcggtttccgcctcgcgacctac
gcgatgtggtggatcaaggcctcgatgcaggagttcatcctgcgctcgtggagcctcgtt
aagatgggcaccactgcggcgcagaagaagctgttcttcaaccttcgccggatgaagaag
cagctcgaagcctatgaggacaccgacctcagccccgaagacgtgaccaagattgcaacc
gacctcggcgtgcccgagcaggaagtgatcaacatgaaccggcggatgatgatgggcggc
gacggctcgctcaacacgccgatgcgcgggggcgaggaaggttctggcgaatggcaggac
tggctgaccgacgatcgtcccttgcaggacgaaaccgtcgccgaggccgaggaaagccag
atgcgaatggaaatgctttccgaggcgatgaacagcctcaacgagcgtgaacgccacatc
ctgaccgagcgccggttgaccgaaaagccgcagacgctcgaagagctgagccaggcctac
gacgtcagccgcgaacgcatccgccagatcgaggtgcgcgccttcgaaaagctgcaaaag
gcaatgcagcggatcgcgggcgagcggttgctgccgggcgtcgcctga
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