Paralichthys olivaceus (Japanese flounder): 109626554
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Entry
109626554 CDS
T06037
Name
(RefSeq) UV excision repair protein RAD23 homolog B-like
KO
K10839
UV excision repair protein RAD23
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Pathway
pov03420
Nucleotide excision repair
pov04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
109626554
09124 Replication and repair
03420 Nucleotide excision repair
109626554
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
pov03051
]
109626554
03400 DNA repair and recombination proteins [BR:
pov03400
]
109626554
Proteasome [BR:
pov03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
109626554
DNA repair and recombination proteins [BR:
pov03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
109626554
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
Rad60-SLD
Rad60-SLD_2
Crinkler
Dsc3_N
CUE
Metal_resist
UBA_3
EAD1
Ubiquitin_5
Med13_C
Motif
Other DBs
NCBI-GeneID:
109626554
NCBI-ProteinID:
XP_019938172
LinkDB
All DBs
Position
Unknown
AA seq
387 aa
AA seq
DB search
MLITLKTLQQLTFKIDIDEEETVKTLKERIEQEKGKDIFSVAGQKLIYAGKILNDDTALK
EYKIDEKNFVVIMVTKPKTASATPQPSPSPSTSAPSSTTPAAPPASSSVSENTIARPSTD
DKPEERQSSAAEPASSPVGSSEASTNTNLLDEAVSNLVTGPSYDAMVNEMMLMGYEREQV
VAALRASFNNPDRAVEYLLTGIPGRDQGNVTGPDAAVSPVSGVTAASTGGIIVPANTGSS
PGAGVNPLSFLRNQPQFHVMRQLIQQNAALLPALLQEIGRENPELLQEISSHQEQFIQML
NEPNPEAVPVSGEGGSGGGSGGAGRLGVDAPGGSHTSYIQVTPQEKEAIERLKALGFPEG
LVIQAYFACEKNEDLAANFLLQQTFDD
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgttgataactttgaaaaccctccagcagctgacgtttaaaatcgacatcgacgaggag
gagacggtgaagactctaaaagagaggatcgaacaggagaagggaaaggacattttttcc
gttgctggacagaagctgatctatgccggtaaaatcctcaacgatgacacggccctcaag
gagtataaaatcgatgagaagaactttgtggtcatcatggtgacaaagcctaaaacagcc
tcggccactccacagccttcaccctcgccttctacttcagctcccagcagcacaactccc
gcggcgcctcccgcttcttcgtctgtctcggaaaacacaatcgcgcgcccctctacagac
gacaaaccggaggagagacagtcctctgctgctgaaccagcttcctccccagtcggaagc
tctgaggcatcaacaaacacaaacctacttgatgaggcagtttcaaatctagtgacaggc
ccgtcatatgatgccatggtgaacgagatgatgctcatgggctacgagagggagcaggtg
gtggcagctttgagagcgagcttcaacaacccagacagagctgtggagtacctgcttacg
ggtatcccaggcagagatcagggcaatgtgaccggccctgatgcagcggtgtctccagtg
agcggagttacagctgcatcgacaggtggtattatcgtcccagccaacactggctcttca
ccaggtgctggagtcaatcccctgagtttcctgagaaatcagccccagtttcatgtgatg
cgacagctgatccaacagaacgccgccctgctcccggctctgctgcaggagatcggcaga
gaaaaccccgagctgttgcaggagatcagcagccaccaagagcaattcatccagatgctg
aatgagcccaatccagaggctgtgccagtcagtggcgaaggtggatcgggaggtggatcc
gggggagccggaagattgggggtggatgcacctggcggaagtcacacgagctacattcag
gtcactccgcaggagaaggaggccatcgagaggctaaaagccttaggatttccagaagga
cttgttatacaagcgtactttgcttgtgagaagaacgaggacttggccgccaacttcctt
ttacaacagacctttgatgattga
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