Paralichthys olivaceus (Japanese flounder): 109633670
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Entry
109633670 CDS
T06037
Name
(RefSeq) general transcription factor IIH subunit 2-like isoform X1
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Pathway
pov03022
Basal transcription factors
pov03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
109633670
09124 Replication and repair
03420 Nucleotide excision repair
109633670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pov03021
]
109633670
03400 DNA repair and recombination proteins [BR:
pov03400
]
109633670
Transcription machinery [BR:
pov03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
109633670
DNA repair and recombination proteins [BR:
pov03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
109633670
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
VWA_2
C1_4
VWA
Motif
Other DBs
NCBI-GeneID:
109633670
NCBI-ProteinID:
XP_019949245
LinkDB
All DBs
Position
Unknown
AA seq
394 aa
AA seq
DB search
MDEEPERAKRWEGGYERTWEVLKEDESGSLKATVEEILFQSKRKRVIESHGQVRLGMMRH
LYVVIDCSRSMEDQDLKPNRLTSTLKLMEAFVDEYFDQNPISQVGIITTKSKRAEKLTDL
TGNPKKHISALKKAVDTVCVGEPSLYNSLNLAIQSLKHMPGHTSREILIILSSLTTCDPA
NIYELIKTLKSLKVRVSVIGLSAEVRVCTVLTRETGGLYHVILDESHFKELLMMHIKPPA
ASSSSECSLIRMGFPQHTIAALTDQDAKPSFSMSHLDSSGGPGLSLGGYFCPQCHGKYTE
LPVECKVCGLTLVSAPHLARSFHHLFPLQAFVESRVEELQGDRFCQACQGELKDKCVFTC
PSCHSVFCLECDIFIHDSLHCCPCCTHCNTAPSS
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atggacgaagaaccagagagagcgaagcgctgggaaggaggctacgagaggacatgggag
gttctgaaggaggatgaatctggctcactcaaagccacagtggaagagatcctgttccag
tccaaaaggaaaagggtgattgaaagccatggacaagtgaggcttggaatgatgcgtcac
ctctatgtggtgattgactgttcaagaagcatggaagaccaggacttgaaacctaaccgc
ctcacctcaactctaaagctgatggaagcttttgtggatgagtatttcgaccaaaacccc
atcagtcaggtgggcattatcaccacaaagagtaaaagggctgagaagttgactgacctg
acaggaaaccctaagaaacacatttctgctctgaagaaagccgtggacactgtgtgtgtc
ggagagccgtccctgtacaactctctcaacctggccatacagtccctcaagcacatgcct
ggacacaccagccgggagatcctgataatccttagcagcctcacaacatgtgacccagcc
aacatctatgagctcatcaagaccctgaagtctctgaaggtgcgggtgtcagtaatcggc
ctgtcggcagaggtccgggtgtgcacggtgttgaccagggagacgggtggcttataccac
gtcatcctggatgaaagtcacttcaaagagcttctgatgatgcacatcaaaccgcccgca
gccagctcctcatctgaatgctctttaatacgcatgggatttcctcagcacactatcgct
gctctgactgaccaggatgccaagccttcattcagcatgtctcatctggacagcagtggt
ggtcccggtctgtctctgggagggtacttctgtccacagtgccacggcaaatacacagag
cttcctgtggagtgtaaagtctgtggtttgactctggtgtcagccccacatctcgccaga
tccttccaccacctcttccccctccaggcctttgtagagagtcgtgtggaggagctccaa
ggagacaggttctgtcaagcttgtcaaggggagttaaaggataaatgtgtattcacctgt
ccatcctgtcacagtgtgttctgtttggaatgtgatatcttcatccacgactcactccac
tgctgcccctgctgtactcactgtaacaccgctccctcaagctga
DBGET
integrated database retrieval system
