KEGG   Paralichthys olivaceus (Japanese flounder): 109646596
Entry
109646596         CDS       T06037                                 
Symbol
rfwd2
Name
(RefSeq) E3 ubiquitin-protein ligase RFWD2
  KO
K10143  E3 ubiquitin-protein ligase RFWD2 [EC:2.3.2.27]
Organism
pov  Paralichthys olivaceus (Japanese flounder)
Pathway
pov04115  p53 signaling pathway
pov04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:pov00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    109646596 (rfwd2)
 09140 Cellular Processes
  09143 Cell growth and death
   04115 p53 signaling pathway
    109646596 (rfwd2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pov04121]
    109646596 (rfwd2)
Enzymes [BR:pov01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     109646596 (rfwd2)
Ubiquitin system [BR:pov04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    109646596 (rfwd2)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     109646596 (rfwd2)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz Beta-prop_TEP1_2nd WD40_WDHD1_1st Beta-prop_EML_2 WDR55 Beta-prop_EIPR1 Beta-prop_RIG_2nd zf-C3HC4_2 EIF3I Beta-prop_TEP1_C Beta-prop_WDR19_1st zf-C3HC4 WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 Beta-prop_DCAF4 zf-RING_2 Beta-prop_EML zf-RING_UBOX Beta-prop_WDR90_POC16_2nd zf-C3HC4_4 zf-C3HC4_3 zf-RING_5 RING_XB3-XBAT31 WD40_RFWD3 WD40_like Beta-prop_Vps41 Beta-prop_WDR35_TULP_N Beta-prop_IFT140_1st Beta-prop_DCAF12 Beta-prop_NUP159_NUP214 Beta-prop_IFT122_1st zf-rbx1 zf-RING_10 Beta-prop_SPT8 UvrD-helicase zf_C2H2_10 TilS
Other DBs
NCBI-GeneID: 109646596
NCBI-ProteinID: XP_019967916
LinkDB
Position
Unknown
AA seq 712 aa
MSSGRPQQSAGGASSVPSTSSSTTGGSGNTNGGGGSNNAVTSNGNNSGNVVPTRTLAAAG
EGGLSVPTLPAVPSSRGAFASLTRPSASSGSRKKTLHQAPLYNGLLNSYEDKSNDFVCPI
CFEMIEEAHMTKCGHSFCFKCIRQSLEDSNRCPKCNYIVDNVDQLYPNFLVNELILKQKQ
RSEEKRLKLDHPNGSRWQVFQDVLSPDQENLDLANVNLMLELLVQKKKQLEAESQAAQRQ
ILREFLKEARRNKREQLEQLQKELNFLEEDIKRVEEMSGLYSPMMEAECTVPNVEAPSPA
PSCSSIIEPPDYSQPPGFGGTTQGKRQTWYNSTLASRRKRLTAHFEDLEQCYFSNKMSRI
TDEGRNLNQLDDFMECLSKFTRYNSVRPLATLSYASDLYNGSSIVSSIEFDRDCDYFAIA
GVTKKIKVFEYGTVIQDAVDIHYPVNEMTCNSKISCISWSSYHKNLLASSDYEGTVILWD
GFTGQRSKVYQEHEKRCWSVDFNLMDPKLLASGSDDAKVKLWSTNLDNSVASIEAKANVC
CVKFSPTSRYHLAFGCADHCVHYYDLRNTKQPIMVFKGHRKAVSYAKFVNGEEIVSASTD
SQLKLWNVNKTHCLRSFKGHINEKNFVGLASNGDYVACGSENNSLYLYYKGLSKTLLTFK
FDTVKSVLDKDKKEDDTNEFVSAVCWRALPDGESNVLIAANSQGTIKVLELV
NT seq 2139 nt   +upstreamnt  +downstreamnt
atgtcaagcggccggccacagcaaagcgctggcggtgcgagctccgtgcccagcaccagc
agcagtaccacagggggcagcgggaacacgaacggtggcggcggcagcaacaacgccgtc
acaagtaatggcaacaactctgggaatgttgtgcccacccggaccctggcagcagccggg
gagggcggcttgtcggtgccaactttgcccgccgtgccttcgtcccggggcgcgtttgcc
tctctgaccagaccctctgcgtcctcgggcagcagaaagaaaaccctccatcaagcacct
ttatacaacggccttctgaattcatacgaggataaaagcaacgactttgtctgtcccatc
tgcttcgaaatgatagaggaggcgcacatgacaaagtgtgggcacagtttctgtttcaag
tgtatccgccagagcctcgaggatagcaacagatgtcccaagtgtaactatattgtggat
aatgtagatcagctttacccaaactttcttgtaaatgaactgatcctcaaacagaagcaa
aggtcagaagaaaagagactaaaattagatcatcctaatgggtctaggtggcaggtcttt
caggatgtgttgagtcctgaccaagagaacttggacttggcgaatgtcaacctgatgctg
gaactgctggttcagaagaagaagcagctagaggcggaatctcaagcagctcagagacag
atccttagggagttcctcaaagaagccagaagaaacaagagagagcaactggagcagcta
cagaaagagctcaactttcttgaagaggacataaagcgtgttgaggaaatgagtggcctg
tactctccaatgatggaggcagagtgcacggtgcctaatgtggaggctccctcaccagca
cccagctgcagtagtattattgagccaccagattacagccaacctccaggatttggtgga
acaacccagggaaaacgacagacctggtataacagcaccctggcgtcaagaagaaagagg
ctcacagctcacttcgaggatctagaacagtgctacttctccaacaaaatgtctcgcatc
acagatgagggcaggaatctgaaccagcttgatgatttcatggagtgtttgtccaagttc
actcgttacaactctgtgcggccgctggccaccctctcctacgccagtgacctttataat
ggctccagtattgtctccagtattgagtttgaccgtgactgtgactactttgccattgct
ggtgtgaccaagaagatcaaggtatttgagtacggcactgtgatccaggatgcagtcgac
atccactaccctgtcaacgaaatgacctgcaattccaaaatcagctgtatcagctggagc
agctatcacaagaaccttctggccagcagtgactatgaggggactgtcatcctgtgggat
ggattcaccggccagaggtccaaagtctatcaggaacatgaaaagaggtgttggagtgtt
gacttcaatctgatggaccccaagctcttagcctctggttctgatgatgctaaagtgaag
ctatggtcaaccaatcttgataactcagtggccagcatcgaggccaaggccaacgtctgc
tgcgttaaattcagtccaacttcccgatatcatctggcctttggctgtgcagatcactgt
gtccactactatgatctccgcaacactaagcaaccaatcatggtgttcaaaggtcatagg
aaagccgtgtcctacgccaagtttgtcaacggagaggaaattgtttctgcttcgacagac
agtcagctgaagctgtggaacgtcaacaaaacccactgtctgcgctccttcaagggtcac
atcaatgagaaaaactttgtaggcctcgcttcaaatggagactatgttgcctgcggaagc
gagaacaactccctttacctttactacaaaggactttccaagactttgttaacattcaag
tttgacacggtgaagagtgtcctggacaaggataagaaggaagacgacacaaacgagttc
gtcagtgccgtctgttggagggccctgcctgacggagaatcaaatgtgctgattgctgca
aacagtcaaggaacaatcaaggtacttgagctcgtctga

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