Pandoraea oxalativorans: MB84_18815
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Entry
MB84_18815 CDS
T03840
Name
(GenBank) RNA pseudouridine synthase
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
pox
Pandoraea oxalativorans
Brite
KEGG Orthology (KO) [BR:
pox00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pox03009
]
MB84_18815
Enzymes [BR:
pox01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
MB84_18815
Ribosome biogenesis [BR:
pox03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
MB84_18815
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
NPL
Motif
Other DBs
NCBI-ProteinID:
AKC71081
UniProt:
A0A0E3YD51
LinkDB
All DBs
Position
complement(3214819..3215742)
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AA seq
307 aa
AA seq
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MAQCFPEYSRSRLQAWVEDGRVTLDGEPAKVRQKVAGGEAVVITPAALPEQLAFAPEPVP
LDAVYEDATLAVFNKPAGLVVHPAAGNWSGTLLNGLLHRYGQAAADLPRAGIVHRLDKET
SGLMVVARTLVAQTDLVRQLQARSVKRHYAALVWGRPPQRTVVDAPIGRDPRERTRMAVV
QGQGGKPARTRVVTVASAEWEGSPISLVLCSLDTGRTHQIRVHLSHLGHSLLGDPLYRPR
HKRPALPGGFARQALHAWRLGLIHPEDDAAMHWQAPLPDDMRELMRALGLEFDFTTLPDS
LDDFFPA
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
ctggcgcagtgcttcccggaatattcccgcagtcgtcttcaggcctgggtcgaagatggc
cgcgtcacgctcgacggcgaacccgctaaagtccgccagaaagtggcaggcggtgaagcg
gtggtcatcacgccagcagcgctccccgagcaactggcgttcgcgccggagccggtgccg
ctcgatgccgtctatgaggacgcgacgctcgccgtattcaataagcccgcgggcctcgtc
gttcatccggcggcaggcaactggtccggtacgctcctcaacggtctgctgcatcgttac
ggacaggcggctgcggatctgccgcgtgccggcatcgtccaccggctggacaaagagacg
tccggcctgatggtggtcgcgcgcacgctggtcgcacagaccgatctggtacgccagttg
caggcgcgctcggtcaaacggcattacgccgcgctggtgtggggacgtccgccgcagcgc
accgtcgtggacgcacccatcggtcgcgatccgcgtgaacgcacgcgcatggcggttgtg
caggggcagggcggcaaacccgcgcgcacccgcgtggtgacggtcgccagcgcagaatgg
gaaggatccccgatttcgctggtgctttgttcgctggacacggggcgtacgcaccagatt
cgcgtccatctttcccatctggggcattcgctgttgggcgatccgctttatcgaccgcgt
cacaagcgtccggcgctgccgggcggctttgcgcggcaggcactgcacgcgtggcgtctg
gggctgatccatcccgaggacgatgccgcgatgcactggcaagcgccgctgcccgacgat
atgcgtgaactcatgcgcgcgctcggcctcgaattcgacttcacaacgctccccgattcg
ctcgatgacttcttccctgcctga
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