Pontivivens ytuae: I0K15_20820
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Entry
I0K15_20820 CDS
T06919
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
poz
Pontivivens ytuae
Pathway
poz03030
DNA replication
poz03430
Mismatch repair
poz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
poz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
I0K15_20820
03430 Mismatch repair
I0K15_20820
03440 Homologous recombination
I0K15_20820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
poz03032
]
I0K15_20820
03400 DNA repair and recombination proteins [BR:
poz03400
]
I0K15_20820
Enzymes [BR:
poz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
I0K15_20820
DNA replication proteins [BR:
poz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
I0K15_20820
DNA repair and recombination proteins [BR:
poz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
I0K15_20820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DEDDh_C
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
QPH54179
UniProt:
A0A7S9LRX2
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All DBs
Position
4176044..4177435
Genome browser
AA seq
463 aa
AA seq
DB search
MGPRRRFLALLTGFALALCALFAVALWLGWRQAGGPVAPFLSAGLIGGFAALLLTAGLWL
FLDEQVVRPALRIAAAFRARAHGETKGALPPAPHLGDLVPAATALCDSLDAARADMTARL
AEETALVEAERAQLAALLSEIPIAVMTVNAAHQITLYDRQCVHMLGHVAPLGLDRSVFDY
VEETALRTALGELDAAAGRNFIDVELPTADGSGLVSTRLRPIGRNQGYMLAMEVENAVVA
ERPLVFDFGLIDRTPGAELADRPLSHLSFVVFDSETTGLDPAKDAVVQLAGVRVVNGRVV
EGEVFDHLVDPGRPIPPVAIRVHGVTNEMVAGAPPLAKIGHDFHEFARGAVLVAHNAPFD
LAFLKREETRIGKCFDHPVLDTVLLSAALFGESEEHTLDAIAERLDVAIPGADRHTALGD
ARATAEVLVKMIPMAEGMGIRTFGEAVEVMRRFTRLLPDLNQA
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
gtggggccccgccgccgcttcctcgccctcctcaccggtttcgcgctcgcgctctgcgcg
ctcttcgccgtggccctctggctcggctggcggcaggcgggcgggccggtggcgccgttc
ctctccgctgggctgatcgggggcttcgcggcgctgctgctgaccgcaggactgtggctg
ttcctcgacgaacaggtggtgcgcccggccctgcgcatcgccgccgccttccgcgcgcgg
gcgcatggtgagaccaagggcgccctgccccccgcgccgcatctgggcgacctcgtcccg
gcagcgaccgcgctctgcgacagcctcgacgccgcgcgggccgacatgaccgcgcggctg
gcggaggagacggcactggtggaggccgagcgtgcgcagctggccgccctcctctcagag
atcccgatcgcggtgatgacggtgaacgccgcccaccagatcacgctctacgaccggcaa
tgcgtgcacatgctggggcatgtcgcgccgctcggcctcgaccgctccgtcttcgactat
gtggaggagacggccctgcgcacggccctcggtgagctcgacgcggccgcgggccgcaac
ttcatcgacgtggagctgccgaccgccgatggcagcggcctcgtcagcacgcgcctgcgc
ccgatcgggcgcaaccagggttatatgctcgccatggaggtcgagaacgcggtcgtcgca
gaacgcccgctggtcttcgacttcgggctgatcgaccggacgccgggggcggagctcgcg
gatcgtccgctctcccacctctccttcgtggtgttcgacagtgagacaacggggctcgac
ccggcgaaggacgcggtcgtgcaacttgccggagtgcgcgtggtcaacgggcgtgtggtg
gagggcgaggtcttcgaccacctcgtcgatcccggccgcccgatcccgccagtcgcgatc
cgcgtgcacggggtcacgaacgagatggtggcgggcgccccgccgctcgccaagatcggc
cacgacttccacgagttcgcccgaggcgcggtgctggtcgcgcacaacgcgcccttcgat
cttgccttcctgaagcgggaggaaacgcggatcggcaagtgcttcgaccatccggtgctc
gacacggtgctcttgtccgcggccctgttcggggagagcgaggagcatacgctcgacgcc
atcgccgagcggctcgacgtcgccataccgggtgctgaccggcacacggcgctcggtgac
gcgcgcgccacggcggaggtgctggtgaagatgattccgatggccgaggggatgggcatt
cgcaccttcggcgaggcggtcgaggtgatgcgccgcttcacccgtctgctgcccgatctc
aaccaggcctga
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