Komagataella phaffii: PAS_chr2-1_0041
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Entry
PAS_chr2-1_0041 CDS
T01092
Name
(RefSeq) hypothetical protein
KO
K10882
crossover junction endonuclease EME1 [EC:3.1.22.-]
Organism
ppa
Komagataella phaffii
Pathway
ppa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PAS_chr2-1_0041
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppa03400
]
PAS_chr2-1_0041
DNA repair and recombination proteins [BR:
ppa03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
PAS_chr2-1_0041
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
ERCC4
TBD
5_3_exonuc
Motif
Other DBs
NCBI-GeneID:
8198160
NCBI-ProteinID:
XP_002490921
UniProt:
C4QZG7
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All DBs
Position
2:72637..74013
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AA seq
458 aa
AA seq
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MSLNCGDSDSEVDSFPSSESEFNVLGTNLLVSRRQNNSKTTECSSLSPDFSNKHAAGQST
PKSEIFVDEGSSLILLDNDHLTDRVIEILDSSIMDLEDDNGSPLDRSSSQEENNQVELSL
DEIITSSQFTQEGTNAKEEEPKSYLQQLLERATPQELRRVNKVTRTQEEMLSKVKIEISN
SFLEHIKRKATFEFDSVQIEELDSKHKEIRWKYELDCLYYPEQEIVVPLPQGKIEIVNES
TILLSYTAEEMATNLLNESLISLINEYPADSFFIILVEGWDTYLRSIKTKHNRDFVKEIR
MRLDQEELHQKRLKSTPRPSKPNPVDPDKLWEKVLCMELEFKVNIFPVHNVVDSLEWIKS
FTSTLASRTFNKKHRNTGFERVGTVRSGSNGADCYFQALQQLKYMTPITAKKLMNEYPSI
NRLYDHISRHNHLEGCSKSIREALIKLFTCDNPNELIN
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgagtctcaattgtggtgattctgattcggaggtggactcctttcccagctccgaatct
gaatttaatgttttgggcaccaatcttctagtcagtcggaggcagaacaatagcaaaacc
acagagtgttcaagcttatctcccgacttttccaacaagcacgctgcgggccaaagcaca
ccaaaatctgaaatctttgtggatgaaggaagtagtttaattcttctggataacgatcat
cttacagatagagttattgaaattcttgactcttcaattatggacctggaagacgataat
ggctctcctcttgacagatcaagttcgcaggaggaaaacaaccaagttgagctcagcctt
gacgaaataataactagcagccaattcacacaagaagggaccaatgcaaaggaagaagaa
ccgaaaagttatcttcagcagttattggaacgtgccactcctcaagagttgagacgagtc
aataaagtcactagaacacaagaggagatgttatcgaaagttaagattgaaatatccaac
tcatttttagaacacataaagaggaaggccacttttgaatttgattcggtacagattgag
gagctggactcaaaacacaaggaaatcagatggaaatacgagttggactgcctttattat
ccggagcaggagatagttgttccacttcctcaaggaaagattgaaattgtcaacgagagt
acaatcctcttgagttacacagcagaagaaatggcaacgaatttactaaacgaaagcctc
atatcattaatcaacgagtatcccgccgattcattctttatcattcttgtcgaagggtgg
gatacttacttgaggagcatcaaaacgaaacataatagagattttgtaaaagagataaga
atgcgattggaccaagaggaacttcatcaaaaacggctcaagagcactccccgaccttcc
aagcccaatcctgtcgaccctgacaagttatgggagaaggttctatgtatggaacttgag
ttcaaagtaaacatattccctgttcacaacgtggtagattccctggaatggattaaatca
tttacaagcaccttggcctcgagaacattcaacaagaaacatagaaatacaggcttcgaa
agagtcggaacggtgagatcaggaagtaatggggccgactgctatttccaagcacttcag
cagttaaaatacatgacaccaataacggcaaaaaaactaatgaacgaatatccttctata
aaccgtttatacgatcatatttcccgacataatcacctagaaggatgctcaaagagtatc
agagaggcattgattaaactatttacgtgtgacaacccaaacgagttgataaattaa
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