Komagataella phaffii: PAS_chr4_0987
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Entry
PAS_chr4_0987 CDS
T01092
Name
(RefSeq) hypothetical protein
KO
K18328
lariat debranching enzyme [EC:3.1.-.-]
Organism
ppa
Komagataella phaffii
Brite
KEGG Orthology (KO) [BR:
ppa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ppa03041
]
PAS_chr4_0987
03009 Ribosome biogenesis [BR:
ppa03009
]
PAS_chr4_0987
Spliceosome [BR:
ppa03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
PAS_chr4_0987
Ribosome biogenesis [BR:
ppa03009
]
Eukaryotic type
90S particles
RNase
PAS_chr4_0987
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DBR1
Metallophos
Metallophos_3
Motif
Other DBs
NCBI-GeneID:
8200631
NCBI-ProteinID:
XP_002494178
UniProt:
C4R8S4
LinkDB
All DBs
Position
4:complement(1406638..1408005)
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AA seq
455 aa
AA seq
DB search
MTELRVAIQGCAHGELDKIYERLKMKCRHNLPDLLIICGDFQAFRNTIDMDCASLTNKYK
RLGDFHQYYTGEKKAPVKTIFIGGNHEASNYLTELPYGGYVAPNIYYMGTSGVVWFKGLR
IMGWSGIYLERDFYLPHNEKYPFNEREKRSVYHSRWIDYLKLSLQSNIARSSIMITHDWP
QGIEHYGDLRKLLQNKPFFRSDIEKELLGSPPGRKLLEILAPNYWFSAHLHVRYEASFVS
DVGTKRTIALSGKDKQFPSKRQNVTGLKTKKNQNEIELSVSVSSDDFNSEVNNNDEIALD
LSDASSDSDSLQVNCSSSSAPISQTTRFLALDKCKKDFNDHLEVLPITITDSQHDSARSD
EIFLDQEFLTIIKLVEKFNISPQHKSLDVSSIRTELAQEIPTNGFKIETSLEAPKFQYDS
QWSHSNVSKNLKNMSKLYKTYRNPQTIQLQQIYQS
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgactgaacttcgagtagccatccaaggatgcgcccatggagagcttgacaagatctat
gagcgtttgaagatgaagtgtaggcataatcttccagatctactgataatttgtggtgac
ttccaggccttcaggaatacaattgacatggattgtgcctcgctcaccaataaatacaag
agactgggggacttccatcagtattataccggagagaaaaaggcaccagtgaagacaatt
tttatcggaggcaaccatgaagcttccaactatttgaccgaattgccctatggtgggtac
gtcgctcctaatatctattacatggggacctctggtgtcgtgtggtttaaaggacttcgc
atcatggggtggtcaggtatttatttagagagagatttctaccttccccacaatgaaaag
tatccctttaacgaaagggaaaagagatctgtataccattcaaggtggatagactactta
aaactatctctacagtcaaatattgccagaagtagtataatgataacccacgattggccc
caaggaatagagcattatggcgatctgcgtaagctgttgcaaaataaaccttttttccgt
tcggatattgaaaaagagttgcttggatcaccccccggaagaaagctgttggagattcta
gctccaaactactggttcagcgctcatctacatgtccgatatgaggcaagttttgtcagt
gatgtaggaaccaaaagaacaattgcactttctggaaaagacaaacagttccctagcaag
agacaaaatgtcacgggactgaagactaaaaagaatcaaaacgaaatcgaattgagtgtt
tctgtctcctcagatgactttaactcagaagttaacaataatgatgagattgctttggat
ttatctgacgcatcaagcgattcggattcacttcaagtcaattgttcgtcctcatctgcg
cccatttcacaaaccactcgattcttggctctagataaatgcaaaaaggattttaatgat
catctagaagttttacccatcaccatcactgacagtcaacatgactcagctcgttctgat
gagatctttctggatcaagaatttttaacgattatcaaattggtcgaaaagtttaacata
tcaccacaacacaagtcactagacgtctctagcattcgaacagaattggcacaagagata
cccaccaatggtttcaaaattgaaacgtcattagaggctcccaaatttcaatacgattca
cagtggtcgcactctaacgtttccaaaaatttgaaaaacatgtcaaagctttacaagact
taccgtaaccctcaaaccattcagctgcaacagatttatcagtcctga
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