Pelagovum pacificum: I8N54_00485
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Entry
I8N54_00485 CDS
T06971
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
ppaf
Pelagovum pacificum
Pathway
ppaf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ppaf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
I8N54_00485
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppaf03400
]
I8N54_00485
Enzymes [BR:
ppaf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
I8N54_00485
DNA repair and recombination proteins [BR:
ppaf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
I8N54_00485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
QQA43090
LinkDB
All DBs
Position
95768..96556
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AA seq
262 aa
AA seq
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MTFTLATWNINSVRLREDLVLHLLQTEAPDVLCLQECKSPLDKIPLEGFSALGYRYMVGR
GQKSYNGVAILSKLPIREVAAYDYASLGHARHIAGQLDNGVTIHNFYVPAGGDKPDREVN
EKFGQKLDYLTAMRDAFHAEAPETSILVGDLNIAPREDDVWNHKQLLKVVSHTPIEVEHL
GETQDAGRWVDVTRADIPEGQLYSWWSYRSPDWDSADKGRRLDHIWATPDIAGAAHSSRI
LRSARGWEKPSDHAPVFATFDL
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgaccttcaccctcgccacatggaacatcaactcggtccgcctgcgggaggacctcgtg
ctgcacctgctccagaccgaggcgccagacgtgctgtgtttgcaggagtgcaagtcgccg
ctcgacaagatcccgctcgaggggttctcggcgctcggctatcgctacatggtcggacgg
ggacagaagagctacaacggcgtggcgatcctgtcgaagctgccgatccgtgaggtcgcg
gcctatgactatgccagtctcggccatgcacgccacatcgctggccagctcgacaacggc
gtgacgattcacaatttctacgtgcccgccggtggcgacaaacctgaccgcgaggtgaac
gagaagttcggccagaagctcgactacctgaccgcgatgcgggacgcgttccatgccgag
gcgccggagacgtcgattctcgtcggcgatctgaacatcgccccgcgcgaggatgacgtc
tggaaccacaagcaactgctgaaagtggtgagccacacgccgatcgaggtcgagcacctg
ggcgagactcaggatgccgggcgttgggtcgacgtgacccgcgcggacatccccgagggg
cagctctattcctggtggtcctatcgctcgcccgactgggacagcgcggacaaggggcgg
cggctggaccatatctgggcaacgcccgatatcgcgggtgcggcgcattcgagccgcatc
ctgcggagcgcgcgcggctgggaaaagccgtccgaccatgcgccggtcttcgcgactttc
gatctttaa
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