Pelagovum pacificum: I8N54_08490
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Entry
I8N54_08490 CDS
T06971
Name
(GenBank) RsmB/NOP family class I SAM-dependent RNA methyltransferase
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
ppaf
Pelagovum pacificum
Brite
KEGG Orthology (KO) [BR:
ppaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppaf03009
]
I8N54_08490
Enzymes [BR:
ppaf01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
I8N54_08490
Ribosome biogenesis [BR:
ppaf03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
I8N54_08490
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
Methyltr_RsmF_N
FtsJ
Methyltransf_25
Methyltransf_31
Methyltransf_15
Motif
Other DBs
NCBI-ProteinID:
QQA44590
LinkDB
All DBs
Position
1720028..1721203
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AA seq
391 aa
AA seq
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MTPAARFASAIEILDAWLGGSSLDGAYRHWSRNARYAGSSDRAAIRDLVFDAVRRRRSYS
GLGGTDTGRGLMIGALRAAGVSVSDVFNGRGHAPAPLSQPELAIDRELTRAEWLDVPDWL
LPRFEEALGDRAETVMRTLRDRAPIHLRVNTLNIDREDVIERLSEVSISAEPHPTVETAI
TVTEGARRLPQSEVIEEGLAELQDASSQAVIARLAGPSDSRILDYCAGAGGKSLALCDLF
DAEVHAHDIDPDRMSDLPARAQRAGVDIGYRTTAELKDEAPYDLVLCDAPCSGSGTWRRD
PEGKWMLTPDRLAGICGIQSEILEDVGANVRLGGRLAYVTCSVFKEENEDRAAAFLAAHE
RWSLIDEHRIDPSETGDGFYLAVFQRGPRTT
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
gtgacgccagccgcccgtttcgcaagcgcgatcgagatcctggacgcatggctcgggggc
tcgtcgctcgacggtgcttaccggcattggtcacgtaacgcgcgctatgccggctcgtcc
gaccgggccgcgatccgcgacctcgtgttcgacgccgtgcggcggcggcggtcctactcc
gggctcggcggcaccgacaccgggcgtggtctgatgatcggtgcgctccgggccgccggc
gtctccgtctctgatgtcttcaacgggcgcggccatgcgcctgcacccctgtcgcagccg
gagctcgccatcgaccgggagctgacgcgggcggagtggctcgacgtgccggactggctg
cttccgcgcttcgaggaggcgcttggcgaccgcgccgaaactgtgatgcgtacactccgg
gatcgcgcgccgatccaccttcgggtcaacacgctcaacatcgaccgcgaggacgtgatc
gaacggctgtccgaagtctcgatcagcgccgagccgcacccgacggtcgaaaccgcgatc
accgtgaccgaaggcgcgcgccggctgccgcagagcgaggtgattgaagagggcctcgcc
gagcttcaggatgcctcgtcccaggccgtgatcgcacggctggccggtccttccgacagc
cgcatcctcgattattgcgccggggcaggcgggaagtccctcgcgctctgcgacctgttc
gatgccgaggtccacgcgcacgatatcgaccccgaccggatgtcggacctgccggcgcgc
gcgcagcgggccggagtcgacatcggctaccgcaccactgccgagctgaaggacgaagct
ccctacgacctcgtgctgtgcgacgcgccctgttcgggcagcggtacctggcggcgtgac
ccggaaggcaaatggatgctgacgcccgaccggcttgccgggatctgcggcatccagtcg
gagatactcgaggacgtcggcgccaatgtccgccttggaggtcggctcgcctacgtgacc
tgctccgtcttcaaggaagagaacgaggatcgcgcggctgccttcctcgccgcgcacgaa
cgctggtcgctgatcgacgagcaccgcatcgacccgagcgagaccggcgacggcttctat
ctcgccgtcttccagcggggcccgagaacaacttaa
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