KEGG   Pelagovum pacificum: I8N54_12605
Entry
I8N54_12605       CDS       T06971                                 
Name
(GenBank) ligase-associated DNA damage response DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
ppaf  Pelagovum pacificum
Brite
KEGG Orthology (KO) [BR:ppaf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ppaf03400]
    I8N54_12605
Enzymes [BR:ppaf01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     I8N54_12605
    5.6.2.6  RNA 3'-5' helicase
     I8N54_12605
DNA repair and recombination proteins [BR:ppaf03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    I8N54_12605
SSDB
Motif
Pfam: DEAD_assoc Lhr_WH DEAD Helicase_C ResIII
Other DBs
NCBI-ProteinID: QQA41653
LinkDB
Position
2550099..2552504
AA seq 801 aa
MSALPTAFEDWFASRGWSIHPHQAEMLDRADEPALMLIAPTGGGKTLAGFLPTLVELADG
GHEGLHTLYISPLKALAADIRRNLTTPVTEMGLPIRIEDRTGDTSSSARRRQRADPPHIL
LTTPESLALLTSYEDSHRMFSGLQRVIVDEIHALSESKRGDQLMLALSRLEAMAPGLRRV
GLSATVEDPAALASELARHPDPCPILHADPGPDPDIRMLVTEERPPWAGGGARYSIPAVL
EEVKRHRTTLIFHNTRAQAEIFFHNLWLANEEALPIAIHHGSLAREQRLKVEAAMVTGQL
RAVVCTGTLDLGIDWGDVDLIIQIGAPKNVKRLIQRIGRANHRYNAPSKAILVPANRFEI
VECIAALEAAKERDLDGDPKGPGPRDVLCQHILIRACAGPFLPEDLYREVKSVGAYAGLS
RAAFDDCLEFCATGGYALRAYDRWQRLKQTDETWHLRDPRAATRIRMNIGTIQDTDRVKV
RWRGRGGAPLGEVEEDFAATLTPGDTFLIGGEVVRYDRLREMTIEVSRRPDKKPKIATFM
GTKFATSTQLSQRILRMFEQPSWPELPEHTAEWLALQRDVSKLPEADRILVETFPDEGRH
HLCAYGFAGRNAQQTLGLLLTQRMEVLGLHPLGFVASDYATLIWGLDPVEDPTPLFGPDA
LREDFDHWLSGNAVMKRTFRAVATIAGLIERNIPASGRKSGRQATFSSDILYDTLVRYDP
EHLLLRITQEEALRGLVDFGRIEEMLTRTAGRIDHVRLDRITPLAAPMFLEVGKVPVSAS
GAERLMEEEAARLMETAGLVL
NT seq 2406 nt   +upstreamnt  +downstreamnt
atgtccgccctgcccaccgccttcgaagactggttcgcgtcccggggatggtcgattcac
ccccatcaggcagagatgctggaccgcgcggacgaacccgcgctgatgttgatcgcgccg
acgggcggcggcaagacgctcgcagggttcctgccgacgctggtcgaactggcagacggc
gggcacgaggggctgcatacgctttatatctctccgctcaaggcgcttgccgccgatatc
cggcgcaacctcaccacgccggtgaccgagatgggcctgccgatccggatcgaggaccgg
actggcgacacctcttcctccgcacggcggcgtcagcgggccgatccgccgcacatcctg
ctgaccacgcccgaaagcctcgcgctgctgacctcctatgaggacagccaccgcatgttc
tcaggcctccagcgcgtgatcgtcgatgagattcacgcgctgtcggaaagcaagcgcggc
gatcagctgatgctcgcgctctcccggctggaagcgatggcccccggcctgcgccgtgtc
ggcctgtcggcgacggtcgaggatccggcggccctcgcctcggaacttgcgcggcacccc
gatccctgcccgatcctgcacgccgatcccggacccgaccccgacatccggatgctcgtc
accgaggagcgcccgccctgggccggcggaggcgccagatattccatccccgccgttcta
gaggaggtgaagcgccaccgcacgacgctgatcttccacaacacccgcgcccaggcggag
atcttctttcacaacctatggctcgccaacgaagaggcgctgccgattgcgatccaccac
ggctccctcgcgcgcgagcagcggctcaaggtcgaggccgcgatggtcacgggccagctg
cgcgccgtggtctgcaccggcacgctcgacctcgggatcgactggggcgatgtcgacctc
atcattcagatcggcgcccccaagaacgtgaagcgactgatccagaggatcggccgggcg
aaccaccgctacaacgctccctcgaaagcgatcctcgtccctgcgaaccgtttcgagatc
gtcgaatgtatcgccgccttggaggccgcgaaggaacgcgaccttgatggcgacccgaag
ggccccggcccccgtgacgttctgtgccagcacatcctgataagggcctgtgcaggaccg
ttcctaccggaggacctttaccgcgaggttaagagcgtcggggcttacgccggtttgtcg
cgcgccgccttcgatgattgcctcgaattttgtgcaaccggtggctacgcgctgcgcgcc
tacgaccgctggcagcggctgaaacagaccgatgagacatggcacctgcgcgacccccgc
gccgcgacccggatccgcatgaatatcggaacgatccaggacaccgaccgcgtgaaggtc
cggtggcgcgggcgcggtggcgcgccgctcggcgaagtggaagaggatttcgccgcgacc
ctgacgcccggcgacacgttcctgatcggcggtgaggtcgtgcgctacgaccggctgcgc
gagatgacgatcgaagtgtcgcgccggcccgacaagaagccgaagatcgcgaccttcatg
ggcaccaaattcgcgacctcgactcagctgtcacagcggatcctgcggatgttcgaacag
ccctcgtggcccgaacttcccgagcacacggccgaatggctcgcgctgcagcgcgacgtc
agcaagctgcccgaggccgaccgtatcctggtggagacctttcccgacgagggccgacat
cacctctgcgcctacggtttcgcggggcgcaacgcgcagcagaccctcggcctgctcctg
acccagcggatggaggtcctcgggctacatccgctcgggttcgtcgcaagcgactacgcg
acgctgatctgggggcttgatccggtcgaggacccgactccgctgttcggccccgacgcg
ctgcgcgaggacttcgatcattggctgtcgggcaatgcggtcatgaagcgcacctttcgc
gccgtcgcgaccatcgcggggctgatcgagcgcaatatcccagcctccggacgcaagtcc
gggcggcaggcgacgttttcgtccgatatcctctacgacacgctggtccgctacgatccc
gagcacctgctgctgcggatcacccaggaagaggcgctgcgcggtctcgtcgatttcggc
cggatcgaagagatgctgacccgcaccgccgggcggatcgaccatgtccggctcgaccgg
atcacgcccttggccgcgccgatgttcctcgaggtcggcaaggtgccggtgtccgcctcc
ggagcggagcggctgatggaggaagaggccgcccggctgatggagactgccgggctcgtc
ctctga

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