KEGG   Pectobacterium parmentieri RNS08.42.1A: A8F97_21915
Entry
A8F97_21915       CDS       T04513                                 
Name
(GenBank) RNA chaperone Hfq
  KO
K03666  host factor-I protein
Organism
ppar  Pectobacterium parmentieri RNS08.42.1A
Pathway
ppar02024  Quorum sensing
ppar03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ppar00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    A8F97_21915
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    A8F97_21915
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ppar03019]
    A8F97_21915
   03036 Chromosome and associated proteins [BR:ppar03036]
    A8F97_21915
Messenger RNA biogenesis [BR:ppar03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     A8F97_21915
Chromosome and associated proteins [BR:ppar03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    A8F97_21915
SSDB
Motif
Pfam: Hfq LSM
Other DBs
NCBI-ProteinID: AOR61512
UniProt: A0A0H3I9H6
LinkDB
Position
4816656..4816955
AA seq 99 aa
MAKGQSLQDPFLNALRRERVPVSIYLVNGIKLQGQIESFDQFVILLKNTVSQMVYKHAIS
TVVPSRPVSHHSNNPGGSNNYHGSNTTAQQQSQDADDAE
NT seq 300 nt   +upstreamnt  +downstreamnt
atggctaaggggcaatctttacaagatccgttcttgaacgctttgcgtcgtgaacgtgtt
ccggtttcgatttatttggtgaacggtattaagctgcaaggtcagatcgaatctttcgat
caattcgtgattttgttgaaaaacacggtcagtcagatggtttataaacatgccatctct
acagttgttccttctcgcccagtttctcaccatagcaacaatcctggcggcagcaacaac
tatcatggtagtaacacgactgctcagcaacagtcgcaggatgctgatgacgccgaataa

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