Pectobacterium parmentieri RNS08.42.1A: A8F97_21915
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Entry
A8F97_21915 CDS
T04513
Name
(GenBank) RNA chaperone Hfq
KO
K03666
host factor-I protein
Organism
ppar
Pectobacterium parmentieri RNS08.42.1A
Pathway
ppar02024
Quorum sensing
ppar03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ppar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A8F97_21915
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
A8F97_21915
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppar03019
]
A8F97_21915
03036 Chromosome and associated proteins [BR:
ppar03036
]
A8F97_21915
Messenger RNA biogenesis [BR:
ppar03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
A8F97_21915
Chromosome and associated proteins [BR:
ppar03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
A8F97_21915
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
LSM
Motif
Other DBs
NCBI-ProteinID:
AOR61512
UniProt:
A0A0H3I9H6
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All DBs
Position
4816656..4816955
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AA seq
99 aa
AA seq
DB search
MAKGQSLQDPFLNALRRERVPVSIYLVNGIKLQGQIESFDQFVILLKNTVSQMVYKHAIS
TVVPSRPVSHHSNNPGGSNNYHGSNTTAQQQSQDADDAE
NT seq
300 nt
NT seq
+upstream
nt +downstream
nt
atggctaaggggcaatctttacaagatccgttcttgaacgctttgcgtcgtgaacgtgtt
ccggtttcgatttatttggtgaacggtattaagctgcaaggtcagatcgaatctttcgat
caattcgtgattttgttgaaaaacacggtcagtcagatggtttataaacatgccatctct
acagttgttccttctcgcccagtttctcaccatagcaacaatcctggcggcagcaacaac
tatcatggtagtaacacgactgctcagcaacagtcgcaggatgctgatgacgccgaataa
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