Pseudomonas putida BIRD-1: PPUBIRD1_1667
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Entry
PPUBIRD1_1667 CDS
T01975
Symbol
sucD
Name
(GenBank) SucD
KO
K01902
succinyl-CoA synthetase alpha subunit [EC:
6.2.1.5
]
Organism
ppb
Pseudomonas putida BIRD-1
Pathway
ppb00020
Citrate cycle (TCA cycle)
ppb00640
Propanoate metabolism
ppb00660
C5-Branched dibasic acid metabolism
ppb01100
Metabolic pathways
ppb01110
Biosynthesis of secondary metabolites
ppb01120
Microbial metabolism in diverse environments
ppb01200
Carbon metabolism
Module
ppb_M00009
Citrate cycle (TCA cycle, Krebs cycle)
ppb_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
ppb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
PPUBIRD1_1667 (sucD)
00640 Propanoate metabolism
PPUBIRD1_1667 (sucD)
00660 C5-Branched dibasic acid metabolism
PPUBIRD1_1667 (sucD)
Enzymes [BR:
ppb01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
PPUBIRD1_1667 (sucD)
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GFIT
Motif
Pfam:
CoA_binding
Ligase_CoA
Succ_CoA_lig
CoA_binding_2
Motif
Other DBs
NCBI-ProteinID:
ADR59335
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All DBs
Position
1891005..1891889
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AA seq
294 aa
AA seq
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MSVLINKDTKVICQGFTGSQGTFHSEQAIAYGTKMVGGVTPGKGGTTHLGLPVFNTVKEA
VEATGADASVIYVPAPFCKDSILEAAFGGIKLIVCITEGIPTLDMLDAKVKCDELGVTLI
GPNCPGVITPGECKIGIMPGHIHLPGKVGIVSRSGTLTYEAVKQTTDAGFGQSTCVGIGG
DPIPGSNFIDILKLFQEDPKTEAIVMIGEIGGSAEEEAAAYIKAHVTKPVVSYIAGVTAP
AGKRMGHAGAIISGGKGTADEKFAALQDAGVKTVRSLADIGKALAELTGWEAKK
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtcctgatcaataaagataccaaagtcatctgccagggcttcaccggctcgcag
ggtactttccactccgaacaggccattgcctacggcaccaagatggtcggcggcgtaacc
ccaggcaagggtggcaccacccacctgggcctgccggtgttcaacaccgtcaaggaagcc
gtggaagctaccggcgctgacgcttcggtcatctacgtaccggctccgttctgcaaagac
tcgatcctggaagctgcctttggcggcatcaagctgatcgtctgcatcaccgaaggcatt
cctaccctggacatgctggatgccaaggtcaagtgcgacgagctgggcgtgaccctgatc
ggccctaactgcccaggtgtcatcaccccgggcgagtgcaagatcggcatcatgccaggc
cacatccacttgccaggcaaggtcggtatcgtttcgcgttccggcaccctgacctacgaa
gctgtgaagcagaccaccgacgccggcttcggccagtcgacctgcgtcggcatcggcggt
gacccgatcccgggctccaacttcatcgacatcctgaagctgttccaggaagacccgaag
accgaagcgatcgtgatgatcggtgagatcggcggttcggctgaagaagaagctgcggcc
tacatcaaggcccacgtcaccaagcctgtcgtttcctacatcgccggtgttactgcacct
gcgggcaagcgcatgggccacgctggcgccatcatctccggcggcaagggcactgcggac
gagaagttcgccgccctgcaggacgcgggtgtgaaaaccgtgcgttccctggctgacatc
ggcaaggccctggccgagctgactggctgggaagccaagaagtaa
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