Pseudomonas putida BIRD-1: PPUBIRD1_3207
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Entry
PPUBIRD1_3207 CDS
T01975
Symbol
ihfA
Name
(GenBank) IhfA
KO
K04764
integration host factor subunit alpha
Organism
ppb
Pseudomonas putida BIRD-1
Brite
KEGG Orthology (KO) [BR:
ppb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppb03032
]
PPUBIRD1_3207 (ihfA)
03036 Chromosome and associated proteins [BR:
ppb03036
]
PPUBIRD1_3207 (ihfA)
03400 DNA repair and recombination proteins [BR:
ppb03400
]
PPUBIRD1_3207 (ihfA)
DNA replication proteins [BR:
ppb03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
PPUBIRD1_3207 (ihfA)
Chromosome and associated proteins [BR:
ppb03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
PPUBIRD1_3207 (ihfA)
DNA repair and recombination proteins [BR:
ppb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
PPUBIRD1_3207 (ihfA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-CCDC81_bac_2
HU-HIG
Motif
Other DBs
NCBI-ProteinID:
ADR60806
LinkDB
All DBs
Position
complement(3593357..3593635)
Genome browser
AA seq
92 aa
AA seq
DB search
MAERLYEELGLNKREAKELVELFFEEIRHALEENEQVKLSGFGNFDLRDKRQRPGRNPKT
GEEIPITARRVVTFRPGQKLKARVEAYAGTKP
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
atggccgaaaggctgtacgaggagctggggcttaacaagcgtgaggccaaggagctggtc
gagctgtttttcgaagaaattcggcacgcacttgaagagaacgagcaggtcaagctgtcc
ggtttcggcaacttcgaccttcgcgacaaacgccagcggccgggccgcaaccccaagaca
ggggaagagatcccgatcaccgcacggcgcgtcgtcacctttcgtccagggcagaaattg
aaggcccgggttgaggcctatgctggaaccaagccataa
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