KEGG   Pseudomonas putida BIRD-1: PPUBIRD1_3207
Entry
PPUBIRD1_3207     CDS       T01975                                 
Symbol
ihfA
Name
(GenBank) IhfA
  KO
K04764  integration host factor subunit alpha
Organism
ppb  Pseudomonas putida BIRD-1
Brite
KEGG Orthology (KO) [BR:ppb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ppb03032]
    PPUBIRD1_3207 (ihfA)
   03036 Chromosome and associated proteins [BR:ppb03036]
    PPUBIRD1_3207 (ihfA)
   03400 DNA repair and recombination proteins [BR:ppb03400]
    PPUBIRD1_3207 (ihfA)
DNA replication proteins [BR:ppb03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    PPUBIRD1_3207 (ihfA)
Chromosome and associated proteins [BR:ppb03036]
 Prokaryotic type
  Nucleoid associated proteins
   IHF (integration host factor)
    PPUBIRD1_3207 (ihfA)
DNA repair and recombination proteins [BR:ppb03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Facilitator
      PPUBIRD1_3207 (ihfA)
SSDB
Motif
Pfam: Bac_DNA_binding HU-CCDC81_bac_2 HU-HIG
Other DBs
NCBI-ProteinID: ADR60806
LinkDB
Position
complement(3593357..3593635)
AA seq 92 aa
MAERLYEELGLNKREAKELVELFFEEIRHALEENEQVKLSGFGNFDLRDKRQRPGRNPKT
GEEIPITARRVVTFRPGQKLKARVEAYAGTKP
NT seq 279 nt   +upstreamnt  +downstreamnt
atggccgaaaggctgtacgaggagctggggcttaacaagcgtgaggccaaggagctggtc
gagctgtttttcgaagaaattcggcacgcacttgaagagaacgagcaggtcaagctgtcc
ggtttcggcaacttcgaccttcgcgacaaacgccagcggccgggccgcaaccccaagaca
ggggaagagatcccgatcaccgcacggcgcgtcgtcacctttcgtccagggcagaaattg
aaggcccgggttgaggcctatgctggaaccaagccataa

DBGET integrated database retrieval system