Pseudopropionibacterium propionicum: HMPREF9154_1617
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Entry
HMPREF9154_1617 CDS
T02180
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
ppc
Pseudopropionibacterium propionicum
Pathway
ppc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HMPREF9154_1617
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppc03400
]
HMPREF9154_1617
Enzymes [BR:
ppc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HMPREF9154_1617
DNA repair and recombination proteins [BR:
ppc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HMPREF9154_1617
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
Auto_anti-p27
TF_Zn_Ribbon
zf-ribbon_3
zf-CHY
Motif
Other DBs
NCBI-ProteinID:
AFN47791
LinkDB
All DBs
Position
complement(1750607..1752568)
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AA seq
653 aa
AA seq
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MSATLFEVPAVEQVAKVAVDVPLAHLDRLFDYRIPGKLLEDARPGVRVTVPFAGQVVDGW
LVSVGAPETGGKLADLRSVISPEPILTTRLFDLIRAVADHYAGTWWDVARLAIPPRHSRI
EKQEQRTWPVPGPGGMPEILPGFPGGPELLTALAEGGAPRAFWQVPCVAGPPGDLTGGVL
EAVSASLASGRGALVLFPTIRGMEAGAARLERLLGQGCVARLSWELSRGLRYENYLACSR
GRARVVVGTQSAVFAPLPDPGLIVVVDDGNEGHCFERFPRPHVRSVAMIRAVQDGCALLL
ASHARSCEAQGLIERQWLRELALPSREMRRIGPALRSVPETQQSNPGGTRLRLPRQAFEH
LRIRLASGPVLVSVARAGHSPGLRCARCRARATCPRCGGPLLRPSRDQLLCRLCGHTPVR
FECTRCHATGLRAPIAGSERTAEELGRAFPGVRVINSSAERIRSGIPEEPAIVVATPGGE
PGVPGGYAGALILDVELALSRADLRVGEETLRRWCQVACLVRPAVDGGGLLIVGPPEEPA
VQALLRADPGGFAARELADRAAAGLPPAVKAVQVGGDPDAVAAFLDNDPFTGAEVLGPTL
TRENPDPEAMSLLRCPLEEGRELVRAVKHAAAIRSARKEGGRLFLQVDPMTLT
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
gtgtcggccacgctgttcgaggttccggccgtcgaacaggtcgccaaggtggcggtcgac
gtcccgctcgcgcatctggatcgtctcttcgactaccgtatccccgggaaacttcttgag
gacgcccgcccgggggtgcgggtcaccgttcccttcgccggacaggtggtggacggctgg
ctggtttccgtcggtgccccggagaccggcgggaaactggccgatctgcgttcggttatc
tccccggaaccgatcctgaccacaaggctcttcgatctgatccgggcggtcgccgaccac
tacgcgggaacctggtgggatgtggcgcgcttggcgatcccgccccgccactcgaggatc
gagaagcaggaacaacgtacctggccggttcccgggcccgggggaatgccggagatcctg
ccgggtttccctggaggacccgaactgctcacagcactggcggagggcggcgccccgcgt
gccttctggcaggttccgtgcgtcgccggcccgccgggggatctcaccggaggcgtgctg
gaagctgtttcggcgagcttggcctcgggacgcggggcgctggtcctgttcccgacgatc
cggggcatggaggccggcgccgcccggctggagcggctcctgggacagggttgtgtggcg
cggctcagctgggaactcagcagggggttgcgttacgagaactacctggcgtgttcacgc
ggccgggccagggtagtggtgggaacccagtcggcggtttttgcccccctgcccgatccg
ggcctgatagtggtggttgacgacggcaacgagggacactgcttcgagcggttcccccgc
ccgcacgtgcgttcggtcgcgatgatccgggccgttcaggatggctgcgcactacttctg
gcctcccatgcccgttcttgcgaggcgcagggactgatcgaacgccaatggctccgagaa
ctggccctgccgtcgcgggaaatgcgccgtatcggaccggcgctccggtcggtgcccgag
acccagcagagcaatcccggcggaacccggctgcggcttccccgtcaggccttcgaacac
ctgcggatccggctggcctccgggccggtgctggtctccgtggcccgggccgggcattcc
ccgggtcttcgctgcgcgcggtgccgggcgagggcgacctgcccccggtgcggtggcccg
ctgctccggccctcgcgggaccagctgctctgccgtctgtgcggacacaccccggtccgg
ttcgagtgcacccgctgccacgccaccgggctgcgtgccccgatcgcgggttcggaacgc
accgcggaggaactgggaagggcctttcccggggtgcgggtgatcaactcctctgcggaa
cggatccgttccgggataccggaagagccggcgatcgtcgtcgcgacccccggcggggaa
cccggggttccgggcggctacgcgggtgccttgatcctcgacgtggaactggccctgtcg
cgtgcggacctgcgcgtcggtgaggaaaccctgcgccgttggtgccaggtggcctgcctc
gtacgacccgcggttgacgggggaggacttctcatcgtcgggccaccggaggaacctgcg
gtccaggcgctgctccgggccgatccagggggattcgctgcccgcgaacttgccgatcgt
gccgctgccggcctgcccccggctgtcaaagcggttcaggttggtggcgacccggatgcg
gtggcggctttcctggacaacgatccgttcactggcgccgaggtgctgggacccaccctg
acacgggagaatcccgacccggaggcgatgtcgttgctgcgctgccccctggaggaggga
cgcgaactggtgagggccgtcaagcatgcggccgccatccggtcggcccgcaaggagggc
ggccgactgttcctgcaagtcgatccgatgaccctcacgtga
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