Pseudopropionibacterium propionicum: HMPREF9154_1922
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Entry
HMPREF9154_1922 CDS
T02180
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
ppc
Pseudopropionibacterium propionicum
Pathway
ppc00470
D-Amino acid metabolism
ppc00550
Peptidoglycan biosynthesis
ppc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ppc00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HMPREF9154_1922 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HMPREF9154_1922 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ppc01011
]
HMPREF9154_1922 (murD)
Enzymes [BR:
ppc01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
HMPREF9154_1922 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
ppc01011
]
Precursor biosynthesis
Amino acid ligase
HMPREF9154_1922 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
MurD-like_N
Mur_ligase_C
AlaDh_PNT_C
Transglut_core
TrkA_N
Pyr_redox
NAD_binding_7
Motif
Other DBs
NCBI-ProteinID:
AFN47202
LinkDB
All DBs
Position
complement(2093193..2094647)
Genome browser
AA seq
484 aa
AA seq
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MREFLLTANRLSDWSRVHAVVAGLGVSGYSAADGLLSLGARVTVLDESDTHADKAAILEA
LDATVRLGKGATAELPGDTDLVVTSPGWRPDTPLLTRALERGIPVWGDIELAWRMQQPDR
AIPWLGVTGTNGKTTTTQMAESMLRAAGMRAAAVGNIGRPIVEAILDDEPYDALVVELSS
FQLHWVHTVALHSAAVLNLHEDHLEFYNGPGGYERYVADKARIFERVTNACVYNVAEPET
ERLVEEAEVTEGARAIGFTTGIPAISMIGVVDGLIVDRAFVAQRHSSALELAKVADVRPY
APHNVANACAAAALVRSLGVPARSVAQGLRDLRLAGHRIAEVAEINGVRWIDDSKATNPH
AADSAMRAFPSFVWVAGGQTKGTSFDELITTHRDRIRAAILIGVDRQVIADALSRHAPDV
PVIILDSSDHGVMDEVVSHAARLAREGDAVLLSPGSASLDMFTGYDDRGERFADAVRSLQ
APSS
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
gtgagggagttcctgttgacggcgaaccggctgagtgactggagccgggtgcacgccgtc
gttgcgggcctcggcgtctcgggttactcggcggccgacgggctgctctcgctcggggca
agggtcacggtcctggacgagtcggacacccacgccgacaaggccgccatcctggaggcc
ctcgatgccacggtgcggctcggaaaaggagcaaccgccgaactgcccggggacacggac
ctggtggtcacatccccggggtggcgtcccgacaccccgctgctcacccgggcgctggag
cgcggcatcccggtgtggggggacatcgaactcgcctggcggatgcagcagcccgaccgc
gccatcccgtggctcggggtcaccggcaccaacgggaagaccaccaccacccagatggcc
gagtccatgctccgggccgccgggatgcgtgcggcggcggtcgggaacatcggccgcccc
atcgtggaggccatcctcgacgacgaaccctacgacgcgctggtggtcgagctgtccagc
ttccagctgcactgggtgcacaccgtcgccctccactccgcggcggtgctgaacctgcac
gaggaccacctcgagttctacaacggacccggcgggtacgaacgctacgtggccgacaag
gcaaggatcttcgaacgggtcacgaacgcctgtgtttacaacgtggccgaaccggagacc
gaacgtctcgtggaggaggccgaggtcacggaaggggcccgcgccatcggtttcaccacc
ggtattcccgcaatctccatgatcggtgtggtggacggcctgatcgtcgaccgcgccttc
gtcgcccagcggcacagttccgcgctggaactcgcgaaggtcgcggacgtgcggccctac
gccccgcacaacgtcgccaacgcctgcgcggcggcggcgctggtgcgcagcctcggggtg
ccggcgagatccgtggcccaggggctccgcgacctgcggctcgcagggcatcgcatcgcg
gaggtggccgagatcaacggcgtgcgctggatcgatgactcgaaggcaacgaacccgcat
gcggcggactcggccatgcgggccttcccgtcattcgtgtgggtggcgggcggccagacc
aagggaaccagcttcgacgagctgatcaccacccatcgcgaccgtatccgggcggcgatc
ctcatcggtgtcgaccggcaggtcatagcggacgcattgtcccgacacgcgcctgatgtt
cccgtgatcatcctggacagcagcgaccatggtgtgatggacgaggtggtctcccacgcg
gcgcgtcttgcccgtgagggtgacgcggtgctcctgagccccggaagcgcctcgctcgac
atgttcacgggctacgatgaccgcggtgagcgtttcgccgacgcggtccggagccttcag
gcaccgagcagttag
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