Pelobacter propionicus: Ppro_1873
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Entry
Ppro_1873 CDS
T00436
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ppd
Pelobacter propionicus
Pathway
ppd03420
Nucleotide excision repair
ppd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ppd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Ppro_1873
03430 Mismatch repair
Ppro_1873
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppd03400
]
Ppro_1873
Enzymes [BR:
ppd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Ppro_1873
DNA repair and recombination proteins [BR:
ppd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Ppro_1873
MMR (mismatch excision repair)
Other MMR factors
Ppro_1873
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
UvrD_C_2
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ABK99484
UniProt:
A1AQ64
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All DBs
Position
complement(2013688..2015463)
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AA seq
591 aa
AA seq
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MILAKLNHEQKLAVKQEGHVLLTACPGSGKTRVLIHKLAYNLSKLPENSKKRIAAVTFTV
RASEEIFRRLNGIGINSNNIWSGTLHSFCFEWIIKPYSCYLPELSNGFAIADEAFCAELV
SSLKDKYKLKQIDPVNFRINRDGSYVENKSIQQKLIAEYHSILISNKLIDFELILYYSYK
LLVTYPNIQITLSNIFELICVDEYQDTQDLLYAIISVIIKAGNGKTSLFFVGDTDQAIYA
SLGGVAKSLQEIKAEIDNMPITHLTLTGNYRSSQRIIDFYSNFQTQKYQIHAVGKNAKEE
GLITFNSDIHHSNIVDEIAKLIQLSLDTGIPENEICVLVPQWWLITIVTKKLRASLPGVS
FDASGLAPMSKNRENIWYKLSRLLLTEPNPKIYSSRYRWATDLIDSFRVDTNTEFNELYK
NERDLLRLINSIKSSEMEGIDYLNDCFDQFLQIIGIDQLKYPQLVEHRNLFFDNIDKRLN
DDTFKVPSDIQSFKSFYREMTGVIINTCVGVKGEEFDTVISYGLLNGYVPHWNDIFSGRA
SDAAKKLLYVICSRAKKNLHLISEIGRTTKSGSDLGITPELKCIKFEYDVV
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgattcttgctaaattaaaccacgagcagaagttggccgtgaagcaggaagggcatgta
ttattgacggcttgtcctggaagtgggaaaacacgagtattaatccataaacttgcctac
aacctctcaaagcttcctgaaaacagcaaaaagcgaattgccgccgtaacgttcacagtt
agggcttcggaagaaatatttaggcgattaaatgggatagggattaacagcaataatatc
tggtctggcactcttcattccttttgctttgaatggataataaagccttattcatgttat
ctgccagaattgtcaaatgggtttgcaatagccgacgaagcattttgtgcggaattggtt
agcagccttaaagacaaatacaagctgaagcaaatagatccggtaaatttcagaattaat
agagatggaagttatgttgaaaataaaagtattcaacagaagctaattgctgagtatcac
agcatccttataagtaacaagctcatagattttgagctaattttgtattattcatacaaa
ttgcttgtcacctacccgaatatccaaattacattatcaaatatatttgaactgatatgt
gttgatgaataccaggatactcaggatttactttatgcaattatctcggtaattatcaag
gcaggtaacggaaagacatctttattttttgtcggggatactgaccaagctatctacgct
tcgctcggtggtgtggcaaaaagtttacaggaaattaaagccgaaatagacaatatgcca
ataactcacttgactcttaccggaaactatcggtcaagccaaagaattattgatttttac
tcaaattttcaaactcaaaagtatcagattcatgctgtcggaaaaaacgccaaggaagaa
gggcttataacgttcaattcagatattcatcattcaaatattgttgatgaaattgcgaaa
ttgattcaattaagtttagacacaggcattccagaaaacgaaatttgtgttctcgttcct
caatggtggttaataacgattgttacgaagaaattgcgtgcatcattgccaggtgtgagt
tttgacgcatccgggttagcacccatgtcaaaaaacagagaaaatatttggtataaacta
tcacgtcttttgcttactgaaccaaatccgaaaatttattcttcaaggtacagatgggca
actgatttaattgatagtttccgtgttgacacaaatactgaattcaatgaactttataaa
aatgaacgtgacctgttgaggcttattaattccataaagtcttctgaaatggaaggtatt
gattatttaaacgattgttttgaccaatttctgcaaatcataggcatcgaccagcttaaa
tatccacaacttgtagaacacaggaacctgttcttcgataatattgataaaagattgaat
gacgatacctttaaggtgccaagtgatattcaatcattcaaaagtttttacagggaaatg
acaggcgtaataatcaatacatgtgttggtgtaaaaggcgaagagtttgatacggtcatt
tcctatggactgttaaacggctacgtccctcattggaatgatattttttccggcagggca
tctgatgcagcaaaaaaattgttatatgttatttgttcacgagccaagaagaatttacac
ctgataagtgaaattggcaggacaacgaaaagtgggtctgatttaggcattacgcccgag
ctaaaatgcatcaaattcgagtatgatgttgtctaa
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