Pseudomonas pergaminensis: KUA23_13610
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Entry
KUA23_13610 CDS
T08563
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
ppeg
Pseudomonas pergaminensis
Pathway
ppeg03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ppeg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
KUA23_13610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppeg03400
]
KUA23_13610
DNA repair and recombination proteins [BR:
ppeg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
KUA23_13610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
DDRGK
Motif
Other DBs
NCBI-ProteinID:
USW03663
LinkDB
All DBs
Position
complement(3028032..3028865)
Genome browser
AA seq
277 aa
AA seq
DB search
MPRSIWKGAISFGLVHIPVSLVSATSSQGVDFDWLDKRSMDPVGYKRINKTTGKEVTKEN
IVKGVAFEKGRYVVLSEEEIRSAHPKSTQTIEIIAFVASDQIPLQNIDTPYFLAPDKRGG
KVYALLRETLKKTGKVALANVVLHTKQHLAALMPLDSALVLVMLRWPAEVRSLDELELDS
DVTKPTLAKGELDMAKRLVEDMSADWQPDDYRDSFQEKIMALVAKKAKAGKIEDVETSTD
TEERKSADVIDLTELLKRSLAGKPAKKPAAKKSTKAS
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgccacggtcaatctggaaaggcgccatcagttttggcctggtgcatatcccggtgtcg
ctggtctcggccacgtcatcacagggcgtagacttcgactggctggacaagcgcagcatg
gacccggtgggctacaagcgcatcaacaagaccaccggcaaggaagtcaccaaagaaaac
atcgtcaagggcgtggctttcgagaaaggtcgctatgtggtgctcagcgaagaagaaatc
cgctcagcccaccccaagtcgacccagaccatcgagatcatcgcgtttgtcgccagcgac
cagatcccattgcagaatatcgacaccccttactttctcgccccggacaagcgtgggggc
aaggtctatgccttgctaagggaaacccttaaaaaaaccggcaaggttgcgctggccaac
gtggtgctgcacaccaagcagcacttggcggccttgatgcccctggactcggcgttggta
ctggtgatgctgcgttggcccgccgaagtgcgcagcctggatgaactggaactggacagc
gacgtgaccaaacccaccctcgccaagggtgagttggacatggccaagcgtctggtggaa
gacatgagcgccgattggcagcccgatgattaccgcgacagcttccaggaaaaaatcatg
gcgctggtggccaagaaggccaaggctggcaagatcgaagacgtggaaaccagcacagac
actgaagagcgcaagtccgccgacgtgatcgacctgacggaactgcttaagcgcagcctg
gccggcaaacccgccaagaagcccgcggcgaaaaaatccaccaaggcctcttaa
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