Pseudomonas pergaminensis: KUA23_21660
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Entry
KUA23_21660 CDS
T08563
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K10941
sigma-54 dependent transcriptional regulator, flagellar regulatory protein
Organism
ppeg
Pseudomonas pergaminensis
Pathway
ppeg02020
Two-component system
ppeg02025
Biofilm formation - Pseudomonas aeruginosa
ppeg02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ppeg00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
KUA23_21660
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
KUA23_21660
09142 Cell motility
02040 Flagellar assembly
KUA23_21660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppeg03000
]
KUA23_21660
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
ppeg02035
]
KUA23_21660
Transcription factors [BR:
ppeg03000
]
Prokaryotic type
Helix-turn-helix
Other families
KUA23_21660
Bacterial motility proteins [BR:
ppeg02035
]
Flagellar system
Flagellar assembly proteins
Others
KUA23_21660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
FleQ
Sigma54_activ_2
HTH_8
AAA_5
AAA_16
HTH_50
AAA_7
nSTAND3
GAAD
bpMoxR
AAA_22
AAA_19
AAA
Motif
Other DBs
NCBI-ProteinID:
USV99620
LinkDB
All DBs
Position
complement(4808489..4809964)
Genome browser
AA seq
491 aa
AA seq
DB search
MWRETKILLIDDDSVRRRDLAVILNFLGEENLPCGSHDWQQAVSSLSSSREVICVLIGTV
NAPGAVLGLLKTLSTWDEFLPVLLMGDISSVDLPEDQRRRVLSTLEMPPSYSKLLDSLHR
AQVYREMYDQARERGRHREPNLFRSLVGTSRAIQHVRQMMQQVADTDASVLILGESGTGK
EVVARNLHYHSKRRDGPFVPVNCGAIPAELLESELFGHEKGAFTGAITSRAGRFELANGG
TLFLDEIGDMPLPMQVKLLRVLQERTFERVGSNKTQSVDVRIIAATHKNLESMIEVGSFR
EDLYYRLNVFPIEMAPLRERVEDIPLLMNELISRMEHEKRGSIRFNSAAIMSLCRHGWPG
NVRELANLVERMAIMHPYGVIGVVELPKKFRYVDDEDEQLVDSLRSDMEERVAINGHTPD
FGSTAMLPPEGLDLKDYLGNLEQGLIQQALDDANGIVARAAERLRIRRTTLVEKMRKYGM
SRKEGDEQAED
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgtggcgtgaaaccaaaattctgctgattgatgacgatagcgtccgccgccgcgattta
gcggtgattttgaattttcttggcgaagaaaatttgccctgcggcagccatgactggcag
caggcggtcagctcattgtcatcgagccgtgaagtcatttgtgtgctgatcgggacggtg
aacgctcctggcgctgttttgggcttgttaaagacactgtccacctgggatgagttcctt
cccgtgttgctaatgggcgatatttcttctgtcgacctgccggaagaccagcgccgccga
gtgctttccaccctggaaatgccccccagctacagcaaattgctcgactccctgcaccgt
gcccaggtctatcgcgagatgtacgaccaagcccgcgagcgcggtcgccatcgcgaaccc
aacctgttccgcagcctggtcggcaccagccgtgccatccagcacgtgcgccagatgatg
cagcaagtggccgatactgacgccagcgtgctgatcctcggcgagtccggcactggcaag
gaggtggtcgcgcgcaacctgcactatcactccaagcgccgcgacgggccctttgtgccg
gtcaactgcggggcgattccggcagagctgcttgaaagcgaattgttcggccacgagaag
ggcgcctttaccggggcgatcaccagccgtgccgggcgttttgagctggccaacggcggc
accctgttcctcgacgagatcggcgacatgccgctgccgatgcaggtcaagctgctgcgc
gtgttgcaggagcgtacgttcgagcgcgtgggcagtaacaagacccagagcgtcgacgtg
cgcatcatcgcggcgacccacaagaacctcgagagcatgatcgaggtcggcagcttccgc
gaagacctgtactaccgcctcaacgtattcccgatcgagatggccccgctgcgtgagcgc
gtggaagacatcccgttgctgatgaacgagctgatctcgcgcatggagcacgaaaagcgc
ggttcgatccgcttcaattccgccgcgatcatgtccttgtgccgccacggctggccgggc
aacgtgcgcgagctggccaacctggtggagcgcatggcgatcatgcacccctacggtgtg
atcggcgtggtcgagctgccgaagaaattccgctacgtcgacgacgaagacgagcaactg
gtcgacagcctgcgcagcgacatggaagagcgggtggccatcaacggccataccccggac
ttcggttcgaccgccatgctgccgcccgaaggcctggacctgaaggactacctcggcaac
ctggagcaaggcctgatccagcaggctctggacgacgccaacggcattgtcgcccgtgcc
gccgagcgcctgcgcattcgtcgaaccaccctggtggagaagatgcgcaagtacggcatg
agccgcaaagaaggtgacgaacaggcggaagattga
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