Pediococcus pentosaceus SL4: T256_07935
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Entry
T256_07935 CDS
T02906
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
ppen
Pediococcus pentosaceus SL4
Pathway
ppen03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ppen00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
T256_07935
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppen03400
]
T256_07935
Enzymes [BR:
ppen01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
T256_07935
DNA repair and recombination proteins [BR:
ppen03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
T256_07935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
DUF6365
Motif
Other DBs
NCBI-ProteinID:
AHA05655
LinkDB
All DBs
Position
complement(1546048..1546803)
Genome browser
AA seq
251 aa
AA seq
DB search
MKLISWNVNGLRAAVKHGFLDVFKGLDADIFCIQETKLQEGQIELELPHYYQYWNYAEKK
GYSGTAIFTKKKPLAVRYGLGIEEHDQEGRIITLEFEKFYVITCYTPNSQPKLKRLEYRM
AWDDAFRAYIDQLNQHKPVIFCGDLNVAHQEIDLKNDKTNHKNAGFTDEERNKFTQLLNS
GFTDTYRYFYPSKEGVYSWWSYRFNARANNAGWRIDYFVSSKALDQKLTDAQIHTEIFGS
DHCPVELDLDI
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
ttgaagcttatttcatggaatgtaaatggattgcgtgcagcggttaagcatggatttctg
gatgtttttaagggactagatgcagatatattttgcatccaggaaacaaagttgcaagag
gggcaaattgaattagaattgcctcactactatcaatattggaattatgcggagaaaaaa
ggatattctggtacggcaatttttactaaaaaaaagccgcttgctgtaagatatggtctt
ggaattgaagaacatgaccaagaaggtcgtataattactttagaatttgaaaaattttac
gtaattacttgttatacaccaaattcacagccaaaattaaagagactagaatatcgaatg
gcttgggatgatgcatttagagcatacatagaccagttaaatcagcataaacccgttatt
ttctgtggagatttaaacgtggctcaccaagagattgatttaaagaatgacaaaactaat
cataaaaatgcaggatttacagacgaggaacgcaataaatttacacagttattaaatagt
ggttttacagatacataccgatacttctacccctcaaaagaaggagtttattcttggtgg
agctatcgatttaatgcacgtgctaataatgctggatggcggattgactactttgttagt
tcaaaggcgttggatcaaaaattgactgacgcccagattcatactgaaatttttggttcc
gatcattgtccagtcgaattagatcttgatatataa
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