Pseudomonas putida F1: Pput_3908
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Entry
Pput_3908 CDS
T00537
Name
(GenBank) 2-dehydro-3-deoxyphosphooctonate aldolase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
ppf
Pseudomonas putida F1
Pathway
ppf00540
Lipopolysaccharide biosynthesis
ppf01100
Metabolic pathways
ppf01250
Biosynthesis of nucleotide sugars
Module
ppf_M00063
CMP-KDO biosynthesis
Brite
KEGG Orthology (KO) [BR:
ppf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
Pput_3908
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
ppf01005
]
Pput_3908
Enzymes [BR:
ppf01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
Pput_3908
Lipopolysaccharide biosynthesis proteins [BR:
ppf01005
]
Lipid A
Pput_3908
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
GFO_IDH_MocA
Motif
Other DBs
NCBI-ProteinID:
ABQ80032
UniProt:
A5W7C2
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All DBs
Position
4390886..4391728
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AA seq
280 aa
AA seq
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MIKIKDSIICSNDAPFVLFGGINVLESEELALTACAEYVRVTEKLGIPYVFKASFDKANR
SSIHSYRGPGMEEGLRIFEKVKAEFGVPIITDVHEISQAAPVAEVVDVLQLPAFLARQTD
LVVALAKTGKPVNIKKPQFLSPSQMRNIVDKFQEAGNDQLILCDRGSCMGYDNLVVDMLG
FGVMKRTCNNLPIIFDVTHALQNRDPSGAASGGRREQVVDLARAGMGVGLAGLFLEAHPN
PIQAKCDGPSALPLDKLEPFLAQIKALDDLVKSFEPLVIS
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgattaaaattaaagatagtattatctgctcaaatgatgcccccttcgtccttttcggt
ggcatcaacgtccttgagtctgaagaattagccttgaccgcctgcgcagagtatgttcgt
gtcactgagaaattgggtattccctatgtattcaaagccagcttcgacaaagcgaaccgg
tcgtctattcactcctaccgcggccccggcatggaagaaggccttcgcatttttgagaaa
gtcaaagctgagtttggtgtaccaatcatcaccgatgtccatgaaatctctcaggccgct
ccagtagctgaagttgtggatgtactccaactacccgctttcctcgcccgacaaacggac
cttgttgtagccctggccaaaacaggcaaaccggtcaatattaagaagcctcagtttttg
agcccttcgcaaatgcgtaatatcgtggataagtttcaggaggcgggaaacgatcaacta
atactatgcgaccgcggcagctgcatgggatatgacaacttggtcgtagacatgcttggc
ttcggcgtgatgaagcgtacctgcaacaatcttccaattatattcgatgtcacacatgca
ttacaaaaccgcgacccctctggcgcagcttctggcggacggcgtgaacaagttgtcgat
ctggcacgtgcaggcatgggcgtaggcctggctggattattcttagaggcacaccctaat
ccaatccaagccaagtgcgatggccctagcgcattgcctttggataaattggagccattc
ttagcccagatcaaggcacttgatgacttagtcaaatctttcgagccattggtaatttca
taa
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