Pseudomonas putida GB-1: PputGB1_1976
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Entry
PputGB1_1976 CDS
T00650
Name
(GenBank) leucine-rich repeat protein
Organism
ppg
Pseudomonas putida GB-1
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NEL
DUF6543
LRR_8
LRR_4
DUF928
Motif
Other DBs
NCBI-ProteinID:
ABY97879
UniProt:
B0KKH3
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Position
2220117..2224298
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AA seq
1393 aa
AA seq
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MATSVIPADSIDALIASRLPGWLKGASAEHLALLRVALLRQQKAQDALNARLQAISPLET
FAESLLASALAEHSITQLDLHLAQVTLVTRRLNPPIAPSLPLYWSQIVSTQVLLSAALHN
FHENETLPGWFATGSQLVDASGQVLPLSVKAFVELCRRLDIGRQYQNHLKLHLEGEVITE
VMEEASSANLDAAAILARTKGEIDEQTYQRIARIVNAAPLSPADNTVLKCHTLRLLGKQV
VGALVIEVRQHAELLGVIAWFPEDPYAPVSGYATWELLYTALGVRLRSEAYRKYFQRFIA
ERDRVAFHTALNLQLTQDDTGSPLELDGRCFVVEGGVFVALRKARLHKILDDARVLAVST
EDEDIADRHARLQGYLNLGLSIAGLAALFVPVLGQALLGLTAVQLADEVYEGYQDWQLGD
RNAALGHLFNVAETVALGAVTAAGTAALGKLAQRVARVDAMVPVSLEDGQLRLCDPALSA
YQHDGVNLIVGQAATENGRTLRRLHDATYEVSEHSDGTLRIHHPTRPGAYVPALEHNGAG
GWVHEFEQPQCWQDAAYMVRRLASRTAQVSDEAASVALQVTGFDADCLRRLLLENAPPPA
RLLDALERQQLHHDYPALRGGAFEELFNERQVNPQAADHLLMRNFPSLSHRCAWEIVEGA
NSDELESLTSAGRVPLALAERARWAVRDSRIDRACAGLRQASAANDDSARLARGLIDAIA
PWPAGVEVELPTADQGGLLQALMRQLDSRQLQLLGGSQMTESALGERLGREALADREAAA
RLIGLARVGQGIRPPVRLYDGRLGYPLSGHLSGTRQALKRTLNHVYPLMSNEQLEAYLQD
LAQRGIDPWNHVSQLLRAKFSLKQALQSWRNETGLNIIRRLRRIKVARRIMASWQRMNPG
ELTGDYHLTIAGDRVGDLPSLPENVAFDHITHLTLRDMRMAALDAGFLARFSKVRNLDLR
GNQLTRLPAGIEQLAELRNLRLGGNRIVLSSDDNLRLSQLVGLRRLELNGNPVGLLPPLT
SFPLLRRLSLRNTGLGNLPAELARHGNLELLDMRGNQIQTLPEALSMLPLRLLGGLELHD
NPLSDETLQRLQLARAAAGASERTQATHLSIDASDATPWLSGFTAAQREVRLARWNLLRQ
EDGASDLFQFIADLQDLREYHARPRDLQARVWHILEACEQHAEVRASLFEQASRPRSCSD
ELLLTLSELEVGAMASRAASASSGLQRERALVMLGRSLSRLDKVNAIAARHIAHYYSDDP
VEVYLAYRVKLAESLDLPAQPEHMAYESVSGVSHKDLESARSEVLREETPQSLAQALADR
SFWQDYLSSHQSARFSRMNEPFQQRLDTLLEQSEALSDHDYLMQTEQISAEREAAQRQLF
LELSREAIERQGL
NT seq
4182 nt
NT seq
+upstream
nt +downstream
nt
atggctacttctgtaatacctgctgactccatcgatgcgctgattgccagccgactgcca
ggttggctcaaaggtgcttcagccgaacacctggctttattgcgtgtggcgttgctgcgt
caacaaaaagcccaggacgccctcaacgcccggctgcaagccatcagccccctggaaacc
tttgccgagtcgttgcttgcaagcgcgctcgcggagcactcgatcacgcagctagacctg
cacttggcccaggtcaccctggtgacccggcgactgaacccgccgatagcgccctccttg
ccactgtattggtcgcaaattgtcagcacccaggtgcttctttcagcggcgctgcataac
tttcacgaaaatgaaacgctgcctggctggttcgctacagggtcacagttggtcgatgcg
agtgggcaggtgctaccgctgagcgtgaaggcattcgtcgagctctgccgacggctcgat
atcgggcggcagtatcaaaaccacttgaaattgcaccttgaaggcgaggtgatcaccgaa
gtcatggaggaggcgtcaagcgccaacctggacgctgcggccatcctcgccaggaccaag
ggtgagatcgacgagcagacgtatcaacgtattgctcgcattgtgaacgcagcacctttg
tcgcccgccgacaatactgtgttgaagtgccataccttgaggctgctgggcaagcaggtc
gttggtgcacttgtgatcgaagtgcgtcagcacgctgaactactaggagttatcgcgtgg
tttcccgaggacccctatgccccggtgagcgggtatgcaacctgggagctgctgtacacg
gcgcttggcgtacgtttgcgcagcgaagcgtatcgcaagtacttccagcgttttatcgca
gagcgtgatcgggtcgccttccatacggccctgaacttgcagctcacgcaagacgataca
ggttcaccgcttgagctggatggccgctgctttgtggtcgaggggggcgtgttcgtcgca
ctgcgcaaagcccgtctccacaaaatactggatgacgctcgggttttggcggtgtcgaca
gaggatgaggatatcgccgaccgccacgcacgcttacaaggttatctgaacttggggctt
agcattgcaggcctggccgcgctgttcgtgccggtgttgggtcaggccttgcttgggctg
acggcagtgcaattggcggacgaggtgtacgaaggctaccaggattggcaactgggcgac
cgcaacgccgcattggggcacctgttcaacgtggccgagacggtggcgctgggggcggtg
acggccgccggcacggcggcactcggcaagctggcccagcgagtggcacgcgtagatgcc
atggtgccggtgagtttggaggatggccagttacgcttgtgcgatccagcgctgtcggcg
tatcagcatgatggcgtcaatttgatcgttgggcaggcggccactgaaaatggccgaacg
ctgaggcgcctgcacgatgctacctatgaggtaagcgaacacagcgatggcacattgcgt
attcatcaccccacgcggccgggggcctatgtaccagctcttgaacacaatggtgccgga
ggatgggtgcatgagtttgagcagccgcagtgctggcaggacgccgcttacatggtgcgc
cgccttgccagccgcacggcccaagtgtccgacgaggcggcgtctgttgcgctacaggtc
accggtttcgatgcagattgcctgcgccgtttgttactggaaaatgcgccacccccggca
cgcttgctcgacgcccttgaacgtcagcaattgcaccatgattacccggcattacggggc
ggtgctttcgaggaattgttcaatgagcggcaggtcaatccgcaggcagcggaccaccta
ttgatgcggaacttcccaagcctttcccaccgctgcgcatgggaaatcgttgaaggggca
aatagcgacgaactggaaagcctgaccagcgcagggcgggtaccgttggctttggcggag
cgggcgcgctgggcggtgcgcgacagccggatagaccgtgcctgcgcaggtttgcgccag
gcctctgccgcaaatgacgacagcgcaaggctcgcgcgggggctgatcgatgccatcgca
ccctggccggctggggtcgaggttgaactgcctaccgctgaccagggtgggttattgcaa
gcgttaatgcggcagctggacagccgccagctacaactgctcggcggtagccaaatgacg
gaaagcgcgctgggcgagcggcttgggcgtgaagcgcttgctgaccgtgaagcggcggcc
cgtttgattgggctggcccgggtggggcagggtatacgccctcctgtgcgtttatacgat
gggcgtttgggctatccgctcagcggccacctgtcggggacgcgccaggcactaaagcgc
acgttgaatcacgtgtacccgctgatgagcaacgaacaattggaggcgtatctgcaagac
ctggctcaacgggggattgacccgtggaaccatgtcagccagctgttacgggccaagttt
agtctcaagcaggcattgcaaagctggcggaatgaaacggggctgaacattattcgccgg
ttgcgtcgcatcaaggttgccaggcgcattatggcgagttggcagcgcatgaaccctggg
gagttgacgggtgattatcacctgacgatcgcgggtgacagagtgggtgacttgccgtcc
ttgcccgagaacgtggcttttgaccatatcacgcacctgaccctacgtgatatgcggatg
gcggcccttgacgcgggtttccttgctcgctttagcaaggtgcgtaacctggatttgcgt
ggcaaccagcttacacgccttcctgcaggtatcgagcaactggccgaattgaggaaccta
cgccttggtggcaatcggatcgttctttccagcgacgataatcttcgcttgagccagctt
gtggggctgcgccgtctggagctcaacggcaaccctgtgggcctgctgccacccttgaca
tcattccccttgctgcgccgtttgtccttgcgcaacacagggctgggcaacttgccagct
gaattggccaggcacggaaatctggagttgctggacatgcgtggcaaccagatccagacg
ttgcctgaagcgctgtccatgttgccgctacgtttgctaggggggctggagctgcacgac
aatccactctcggatgaaaccctccaacgcttgcaattggccagggccgcagcgggggca
tctgagcgtacgcaagcgactcacctatcgattgacgccagcgacgcaaccccatggttg
tcagggtttactgcggcacaacgcgaagttcgattggcgcgttggaacctgttgcgccaa
gaggacggggcgagtgatctgttccaatttatcgctgatttgcaggatttgcgtgaatac
cacgcacgcccccgtgaccttcaagcgcgcgtgtggcatatcctcgaagcgtgcgagcag
cacgccgaagtgcgtgccagccttttcgagcaagctagccggccgcgcagctgcagtgac
gagttgctgctgacgctgagcgagctggaggttggcgcgatggcctccagggctgcatcg
gccagtagtggtttgcaaagggagcgggcgctggtgatgctggggcgttcgttgtctcgt
ctggacaaggtaaacgcgatagcggcacggcatatcgcccactattactcggacgatccc
gtcgaagtttacctggcctatcgtgtcaaactggctgaaagcctcgacctcccggcgcag
cctgaacatatggcgtacgagagtgtaagcggggttagccataaagacctggagtcggcc
cgcagcgaggtactgcgggaggagacgccacaatccttggctcaagcgcttgccgatcga
tccttttggcaagattacttaagcagtcaccaatcggcgcgtttcagccgcatgaacgag
ccgttccagcagcgcctggatacattgctcgagcaatcggaagcgctaagcgatcatgac
tacctcatgcaaaccgagcagatcagtgcagagcgtgaggcagcgcaacgccagcttttt
cttgagttgagccgcgaggccattgagcgccagggcctatga
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