Pannonibacter phragmitetus: APZ00_00805
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Entry
APZ00_00805 CDS
T04214
Name
(GenBank) DNA polymerase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
pphr
Pannonibacter phragmitetus
Pathway
pphr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pphr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
APZ00_00805
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pphr03400
]
APZ00_00805
Enzymes [BR:
pphr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
APZ00_00805
DNA repair and recombination proteins [BR:
pphr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
APZ00_00805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ALV25798
UniProt:
A0A0U3NX34
LinkDB
All DBs
Position
177341..178375
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AA seq
344 aa
AA seq
DB search
MITSFSASGLTARHIEALLDFLQGAGVDGWVEDDVIDRFAQSALEAEQAAMARQSRGAPG
PQGMPAAPGRSFDAGPGMADPRGGGFSPQDYGQGPVQSRIAGQAAPPPLNLPSLNRNAAP
EPQAQAPVSASTDPAVIPGEQAVKSAREAAKSAATLEDLQACLAAFNGCNLRLTAKSLVF
ADGNPSARVMLVGEAPGRDEDLSGVPFIGRSGQLLDRMLAAIGLDRSSVYIANVVPWRPP
GNRTPTPQETEICRPFIARQIELANPDFLVFLGAASAKALTGNTDGIRRMRGRWMDYDAG
GRKIRAIATYHPAYLLRSPLEKRLAWRDFLALRQALSSASDAIG
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgatcacgtctttctcagcatctggcctgacggcccggcacatcgaggcgcttctggac
tttcttcagggcgccggtgtggatggctgggtggaagatgacgtcatcgaccgttttgcc
cagtcggcgctggaggcagagcaggctgcgatggcgcgccagtcgcgcggagcgccgggg
ccgcagggcatgccggcagcgccgggccgcagctttgatgcaggccctggcatggcggac
ccgcgcggcggcggtttcagcccgcaagattacggtcagggtccggttcagtcgcgcatt
gccggtcaagccgccccgccgcctctcaatctgccgtcactcaaccgcaatgccgcgccc
gaaccgcaggcgcaggcacctgtttctgcctccacggatccggcggtcatccccggcgaa
caggcggtgaagtctgcccgggaagcggcaaagtcagccgcaacgctggaagacctgcag
gcctgccttgccgccttcaacggctgcaatctgcgcctcactgcaaagtcactggtcttt
gccgatggcaatccgtccgcccgggtgatgctggtgggcgaagcgccgggccgggacgag
gatctgtccggcgtgcccttcatcggccgctccggacagttgctggaccggatgctggcg
gccatcgggctcgacagatcttccgtctatatcgccaatgtcgtgccctggcgcccgccg
ggcaaccgcacgccgacaccgcaggaaacggaaatctgccgtcctttcatcgcccggcag
atcgaactggccaacccggattttctggtcttcctgggcgctgcgtccgccaaggcgctg
acaggcaacacggatggcatccgccgcatgcgcgggcgctggatggattatgatgcgggc
ggccgcaagatccgcgccatcgcgacctatcacccggcctatctcctgcgcagcccgctg
gaaaaacggcttgcctggcgggacttccttgcgttgagacaagcactttccagcgcaagt
gacgcaattggatga
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