Phaeobacter piscinae: PhaeoP14_00480
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Entry
PhaeoP14_00480 CDS
T05105
Symbol
gcvP_1
Name
(GenBank) glycine dehydrogenase
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
ppic
Phaeobacter piscinae
Pathway
ppic00260
Glycine, serine and threonine metabolism
ppic00630
Glyoxylate and dicarboxylate metabolism
ppic00785
Lipoic acid metabolism
ppic01100
Metabolic pathways
ppic01110
Biosynthesis of secondary metabolites
ppic01200
Carbon metabolism
Module
ppic_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
ppic00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
PhaeoP14_00480 (gcvP_1)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
PhaeoP14_00480 (gcvP_1)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
PhaeoP14_00480 (gcvP_1)
Enzymes [BR:
ppic01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
PhaeoP14_00480 (gcvP_1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Beta_elim_lyase
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
ATG38610
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Position
534065..536914
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AA seq
949 aa
AA seq
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MSFEPTDYLPYDFANRRHIGPSPEEMDDMLAVVGAKSLDALIDDTVPATIRQAAALEFGR
PLSERELLHHMREVAGKNVLKTSLIGQGYHGTVTPPAIQRNILENPAWYTAYTPYQPEIS
QGRLEALLNFQTMISDLTGLEIANASLLDEATACAEAMTVAQRVSKSKAKAFFVDRDCHP
QNIAVIQTRAAPLGIEVIVGNPDRLDASAVFGALFQYPGTYGHVRDFTDHIAQLHAHKAI
GVVAADPLSLTLLKEPGAMGADIAVGSTQRFGVPVGAGGPHAAYMATKDAYKRAIPGRIV
GVSVDAHGNRAYRLSLQTREQHIRREKATSNVCTAQALLAVMASMYAVFHGPKGLKAIAQ
RIHRKTVRLAKGLEEAGFRVDPRSFFDTITVDVGPLQKAVLKSAVDEGLNLRRVGETRVG
ITLDEVTRSETIEAVWRAFGIRRGDDDFTPEYRVPENMHRTSDYLTHPIFHMNRAETEMM
RYMRRLADRDLALDRAMIPLGSCTMKLNAAAEMMPLSWPEFANIHPFAPADQMQGYAEMV
SDLSEKLCQITGYDAISMQPNSGAQGEYAGLLSIAAYHRANGQGHRNICLIPMSAHGTNP
ASAQMVGWKVVVVKSAENGDIDLDDFREKAEKHAENLAGCMITYPSTHGVFEETVHEVCQ
ITHDHGGQVYIDGANMNAMVGLSRPGDLGGDVSHLNLHKTFAIPHGGGGPGMGPIGVKAH
LQPHLPGHPETGGEEGPVSAAPFGSASILTISWAYCLMMGGAGLTQATKVAILNANYIAK
RLEGAYDVLYKGPTGRVAHECILDTRPFEASANVTVDDVAKRLIDSGFHAPTMSWPVAGT
LMVEPTESETKAELDRFCEAMLSIREEIRAVEAGELDADNNALKNAPHTMEDLVKDWDRP
YSREQGCFPPGAFRVDKYWPPVNRVDNAYGDRHLVCTCPPMEDYAEAAE
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttgaacccacggattatctgccttacgactttgccaaccgccgccacatcggc
ccgtcacccgaggaaatggatgacatgcttgccgtggtcggcgccaagagcctggacgcg
ctgatcgacgacaccgtgcccgccaccatccgtcaggccgccgcgctggagtttggccgc
ccgttgtccgaacgtgagctgctgcatcacatgcgtgaggtcgcgggcaagaacgttctg
aagacctcgcttattggtcagggctaccatggcaccgtgaccccgcccgcgatccagcgc
aacattctggaaaacccggcatggtacacggcctacacgccctatcagcccgaaatctcg
cagggccgtcttgaggcgctgctgaatttccagaccatgatttcagacctcaccggtctg
gaaatcgccaatgcctcgcttctggatgaggcgaccgcctgcgccgaggcgatgactgtg
gcgcagcgggtctccaaatcaaaggccaaggcgttttttgtcgatcgcgactgccacccg
cagaacatcgcggtgatccagacccgcgccgcgccgctggggattgaggtgattgtcggc
aacccggataggctggatgcctcggcggtctttggcgcgctgttccaatatcccggcacc
tatggccatgtgcgcgatttcaccgatcacatcgcccagctgcacgcgcataaggccatc
ggcgttgtcgcggcagatccgctgtcgctgaccctgctgaaggagccgggcgcgatgggc
gccgacatcgctgtcggctcgacccagcgctttggcgtgccggttggcgccggtggtccg
catgcggcctatatggccaccaaggatgcctataaacgcgcgatcccgggccgcatcgtc
ggcgtgtcggtcgatgcccatggcaaccgcgcctatcgcctgtcgctgcaaacccgcgaa
cagcacatccgccgcgagaaggcgacctccaacgtctgtaccgcgcaggccctgctggcg
gtgatggcctctatgtatgcggtcttccatggccccaaaggtctgaaagccatcgcgcag
cgcatccaccgcaaaactgtccgtctggccaaggggctggaggaggcaggcttcagggtg
gatcccagatccttcttcgatacgatcaccgtggatgttggccccttgcagaaggcggtg
ttgaaatccgccgtggacgaagggctgaacctgcgccgggttggcgaaacccgcgttggt
atcaccctggatgaggtgactcgctcagagaccatcgaagcggtctggcgcgccttcggc
atccgccgcggcgacgatgatttcacgcctgagtatcgcgtgccagagaacatgcaccgc
acatccgattacctgacgcatccgattttccacatgaaccgggccgagaccgagatgatg
cgctatatgcgccgtctggccgaccgcgatctggcgctggaccgcgcgatgatcccgctg
ggctcctgcacgatgaagctcaacgccgcggcagaaatgatgccgctcagctggccggaa
tttgccaatatccacccctttgcgcctgctgatcagatgcagggctacgccgagatggtc
agcgacctgtcagagaaactgtgccagatcaccggctatgacgcgatttccatgcagccg
aactctggcgcgcagggcgaatatgcgggccttctgtccatcgcggcctatcaccgcgcc
aacgggcagggccatcgcaacatctgtctgatcccgatgtccgctcatggtactaacccg
gcctctgcccagatggtggggtggaaagttgtggtggtgaaatccgccgaaaacggcgat
atcgacctcgatgattttcgtgaaaaggcggagaaacacgccgaaaacctcgcaggctgc
atgatcacctacccctcgacccatggcgtgtttgaggaaaccgtgcatgaggtctgccag
atcacccatgatcacggcggtcaggtctacatcgacggggccaatatgaacgcgatggtg
ggcctgtcgcgtcccggtgatctgggcggcgatgtgagccacctgaacctgcataaaacc
tttgccatcccgcatggtggtggcggccccggcatgggtccgattggggtgaaggcgcat
ttgcagccacatctgcccggtcaccccgaaaccggcggggaggaaggcccggtctcggcc
gcgcccttcggctctgcctccatcctgaccatcagctgggcctattgcctgatgatgggc
ggtgcgggtctgacccaggcgacgaaggtggcgatcctcaatgccaactacatcgccaag
cgtctcgaaggggcatatgatgtgctctataaggggcccacgggccgcgtcgcgcatgag
tgcatcttggacacgcgcccgtttgaggccagcgccaatgtcaccgtggatgatgtggcc
aaacgtctgatcgacagcggttttcacgcaccaaccatgtcctggcccgttgctggtacc
ctgatggtggaacccaccgagtccgaaaccaaggccgagttggaccggttttgtgaggcc
atgctgtcgatccgcgaggaaatccgcgcagtagaggcgggcgagttggatgcggacaat
aacgcgctgaaaaacgccccccacacgatggaagacctcgtgaaagactgggatcgcccc
tattcccgcgaacagggctgcttccctccgggggcgttccgggtcgacaaatactggccg
ccggtgaaccgtgtcgacaacgcctacggcgaccgccatctggtctgcacctgccccccc
atggaggactacgcagaggcggcagaataa
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