KEGG   Pseudomonas plecoglossicida: RK21_00454
Entry
RK21_00454        CDS       T03646                                 
Name
(GenBank) RNA-binding S4 domain-containing protein
  KO
K06182  23S rRNA pseudouridine2604 synthase [EC:5.4.99.21]
Organism
ppj  Pseudomonas plecoglossicida
Brite
KEGG Orthology (KO) [BR:ppj00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ppj03009]
    RK21_00454
Enzymes [BR:ppj01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.21  23S rRNA pseudouridine2604 synthase
     RK21_00454
Ribosome biogenesis [BR:ppj03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    RK21_00454
SSDB
Motif
Pfam: S4
Other DBs
NCBI-ProteinID: AJG11962
UniProt: A0A0B5KCV4
LinkDB
Position
complement(490934..491659)
AA seq 241 aa
MRIAVMSEPVRLSKRLIEQLGCSRREAELYIEGGWVTVDGVVVEQPQFKVEQQRVELLPG
ARAETLEPVTLLLNQPASVDSETARASMNMSNLSEAHREGVRALHGHFARQACVAPLERG
ASGLQVFTQDWRVTRKIDADLRRLEQEFIVEVRGETTPQALERLARGATRNDRELPKAKA
SWQNETHLRMALKNPQPGQIAELCAYLRLELVGMRRIRLGGVSMGKLPLGQWRYLATTER
F
NT seq 726 nt   +upstreamnt  +downstreamnt
ttgcgaattgccgtcatgtccgaacccgtccgcctgtccaaacgccttatcgagcagctt
ggctgctcccgccgcgaggccgagctgtatatcgagggcggctgggtcacggtcgatggc
gtggtggtcgagcaaccgcagttcaaggtcgagcagcagcgcgtcgaactgctgccgggt
gcccgtgccgaaacgctggaaccggtaaccctgctgctgaaccagccggccagcgtggac
agcgagaccgcccgcgccagcatgaacatgagcaacctcagcgaagcccaccgcgaaggc
gtgcgcgcactgcacgggcattttgcccggcaggcctgcgtggcgccgctggagcgcggt
gccagcggcctgcaggtattcacccaggactggcgggtaacccgcaagatcgacgccgac
ctgcgccgcctggaacaggaattcatcgttgaagtgcgcggcgagaccacgccccaggcg
ctggaacgcctggcgcgcggtgccacccgcaatgaccgcgagctgcctaaagccaaggcc
agctggcagaacgaaacccacctgcgcatggccctgaaaaacccgcagccagggcagatc
gccgagctgtgcgcctacctgcgcctggagctggtaggcatgcgccgcattcgcctgggt
ggcgtatcgatgggcaagttgcccctgggccagtggcgctacctggccactaccgaacgt
ttctaa

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