Pseudomonas plecoglossicida: RK21_04882
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Entry
RK21_04882 CDS
T03646
Name
(GenBank) outer membrane porin
KO
K18093
imipenem/basic amino acid-specific outer membrane pore [EC:3.4.21.-]
Organism
ppj
Pseudomonas plecoglossicida
Pathway
ppj01501
beta-Lactam resistance
ppj02020
Two-component system
Module
ppj_M00745
Imipenem resistance, repression of porin OprD
Brite
KEGG Orthology (KO) [BR:
ppj00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RK21_04882
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
RK21_04882
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppj02000
]
RK21_04882
01504 Antimicrobial resistance genes [BR:
ppj01504
]
RK21_04882
Transporters [BR:
ppj02000
]
Other transporters
Pores ion channels [TC:
1
]
RK21_04882
Antimicrobial resistance genes [BR:
ppj01504
]
Gene sets
beta-Lactam resistance modules
Imipenem resistance, repression of porin OprD [MD:
M00745
]
RK21_04882
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OprD
Motif
Other DBs
NCBI-ProteinID:
AJG16390
UniProt:
A0A0B5KJ27
LinkDB
All DBs
Position
5121350..5122612
Genome browser
AA seq
420 aa
AA seq
DB search
MIRATHGPGCALLATLALCPVLSQAEEPGWSLLSRNYFLHSDFRSPSGSGQNYRQEWAQG
FIGEIRSGFTEGTLGVGIDAHGFLGLKLDGGRGHAGTGLLPRDSDGRAESDYSSAGAALK
LRLGNTQLHYGEMTVETPVFDTSDKRLHPEYATGWFLDNTDLPDWRLQAGHFTAFNNQGN
SSSHDDFSGYGATTDNRAISLAGAAFAPDGPFGGALYAGQLEDTWRQAYLNLNLAEGNWR
LDGNLYKTRDTGNASAGAIDTLAYSLLARYSFGAQALSLAYQKVEGDTPFDFVGGDSIYL
ANSIKYADFNGPGERSWQLRYDLNFATLGAPGLSLMGRYVSGRGIDGSHAPAGGAYAGQY
GDGGKHWERDIDLKYVVQSGAAKDLSLSFSHVSHRANQAQAGDDIDRIYLIIEYPLKGSF
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgatccgcgccacccacggaccaggctgcgccctgctcgccaccctcgccctgtgcccg
gtgctcagccaggccgaagagcccggctggtcgctgctcagccgcaactacttcctgcac
agcgacttccgctcgccctccggcagtggccagaactaccgccaggaatgggcccagggc
ttcattggcgaaatccgctccggcttcaccgagggcacgctcggcgtcggtatcgatgcc
catggctttctcggcctcaagctggacggcggccgcggccatgccggcaccggcctgctg
ccgcgcgacagcgatggccgcgccgagtccgactactccagcgccggcgccgcgctcaag
ctgcgcctgggcaacacccaactgcactacggcgaaatgaccgtggaaaccccggtgttc
gacaccagcgacaaacgcctgcacccggagtacgccaccggctggttcctggacaacacc
gacctgcccgactggcgcctgcaggccgggcacttcaccgccttcaacaaccagggcaac
agctccagccatgatgacttcagcggctacggcgccaccaccgacaaccgtgccatcagc
ctggccggtgccgcgttcgcacccgacgggccattcggcggcgcactgtacgcaggccag
ttggaggacacctggcgccaggcctacctcaacctgaacctggccgagggtaactggcgc
ctggacggcaacctgtacaagacccgcgacaccggcaatgccagtgccggggcaatcgac
accctcgcctacagcctgctggccaggtacagcttcggcgcccaggcgctgagcctggcc
taccagaaggtcgagggcgataccccgttcgacttcgtcggcggcgactccatctacctg
gccaactcgatcaagtacgccgacttcaacggccccggcgagcgctcatggcaactgcgc
tacgacctcaacttcgccaccctcggcgcccccggcctgagcctgatgggccgctacgtc
agcggccgtggcatcgacggtagccatgccccggcaggcggcgcctatgcgggccagtac
ggcgacggcggcaagcactgggagcgcgacatcgacctgaaatacgtggtgcagtcgggc
gccgccaaggacctgagcctgtcgttttcccacgtcagccaccgcgccaaccaggcccag
gctggcgatgacatcgaccggatctacctgatcatcgaatacccactcaaaggcagcttc
tga
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