Pseudomonas plecoglossicida: RK21_05600
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Entry
RK21_05600 CDS
T03646
Name
(GenBank) 3-deoxy-D-manno-octulosonic-acid transferase
KO
K02527
3-deoxy-D-manno-octulosonic-acid transferase [EC:
2.4.99.12
2.4.99.13
2.4.99.14
2.4.99.15
]
Organism
ppj
Pseudomonas plecoglossicida
Pathway
ppj00540
Lipopolysaccharide biosynthesis
ppj01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ppj00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
RK21_05600
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
ppj01005
]
RK21_05600
Enzymes [BR:
ppj01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.12 lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
RK21_05600
2.4.99.13 (Kdo)-lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
RK21_05600
2.4.99.14 (Kdo)2-lipid IVA (2-8) 3-deoxy-D-manno-octulosonic acid transferase
RK21_05600
2.4.99.15 (Kdo)3-lipid IVA (2-4) 3-deoxy-D-manno-octulosonic acid transferase
RK21_05600
Lipopolysaccharide biosynthesis proteins [BR:
ppj01005
]
Lipid A
RK21_05600
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_N
Glycos_transf_1
Glyco_trans_1_2
Epimerase_2
Motif
Other DBs
NCBI-ProteinID:
AJG17108
UniProt:
A0A0B5K9A3
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Position
5909201..5910472
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AA seq
423 aa
AA seq
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MNRTLYTLLFHLGLPLVALRLYLRARKAPAYGQRIGERFAFRLPAMRRGGIWVHAVSVGE
SIAAAPMVRALLKAYPEMPITLTCMTPTGSERIRAMFADEPRVQHCYLPYDLPWAAGRFL
DHVQPKLGIIMETELWPNHIHQCAKRGIPVALANARLSERSARGYGRFARLTRPMLAEMS
LIAVQTETEAQRFRDLGARPECVQVTGSIKFDLKIDEQLLPRARALREQWGAAQRPVWIA
ASTHEGEDALILQAHRQLLQVHGDALLILVPRHPERFAAVHALCSEQFTTARRSAGTPVD
AQTRVLLGDTMGELLFLYALADIAFVGGSLVATGGHNPLEPAALALPVLMGPHVFNFLEI
SAMLREAGALQQVDDADGLAEAVRRLVELPQDAQRMGEAGRAVMRANQGALQRLLDGLGA
LIR
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgaacagaactctctataccttgttgtttcacctgggcctgccgctggttgcgctgcgc
ctgtacctgcgcgcgcgcaaggcgccggcctatggtcaacgcattggcgagcgctttgct
ttcaggctgccggccatgcgcaggggcggcatctgggtgcacgcggtatcggtgggcgag
agcattgcggcggcaccgatggtgcgcgccttgctcaaggcctacccggaaatgccaatc
acgcttacctgcatgaccccgaccggttccgagcgcattcgcgccatgttcgccgacgaa
cctcgcgtgcagcattgctacctgccctacgacctgccttgggcggcagggcgctttctc
gatcatgtacagccgaagttgggcatcatcatggaaaccgagctgtggcccaaccacatc
caccagtgtgcgaagcgcggcattccggtagcgctggcaaacgcacgcttgtctgagcgc
tcggcccgtggctatgggcgctttgccaggctgacccggccgatgctggccgagatgagc
ctgattgccgtgcagaccgaaaccgaggcccagcgttttcgtgacctgggtgcgcgtccg
gagtgcgtgcaggtcaccggttcgatcaagttcgacctgaagatcgacgagcaactgttg
ccgcgtgccagggcattgcgtgaacaatggggggctgcacagcgcccggtgtggatcgcg
gccagtacacatgaaggcgaggatgcgctgatcctgcaggcgcaccggcagttgctgcag
gtgcatggtgatgccttgctgatcctggtgccgcgccaccccgagcgcttcgcagcggtg
catgcgctgtgcagcgaacagttcaccaccgcgcgccgctctgccggcacgccggtcgat
gcgcagactcgcgtattgctcggcgataccatgggcgaactgctgttcctctatgccctg
gccgacattgccttcgtcggtggcagcctggtggcgaccggcgggcacaacccgctggag
cccgcggcgctggccttgccggtactgatggggccgcatgtgttcaacttccttgaaatc
agcgcgatgctgcgcgaggcgggggcgttgcagcaggtggatgatgccgacgggctggcc
gaagcggtgcggcggctggtcgagttgccgcaggatgcacagcgcatgggcgaggcgggc
agggcggtaatgcgggccaatcaaggggctttgcagcggttgctcgatgggctgggtgcc
ttgatccgttga
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