Postia placenta: POSPLDRAFT_97958
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Entry
POSPLDRAFT_97958 CDS
T01162
Name
(GenBank) predicted protein
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
ppl
Postia placenta
Pathway
ppl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ppl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
POSPLDRAFT_97958
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ppl03041
]
POSPLDRAFT_97958
Enzymes [BR:
ppl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
POSPLDRAFT_97958
Spliceosome [BR:
ppl03041
]
Complex C
Other components
Step II factors
POSPLDRAFT_97958
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
S1
AAA_22
DEAD
AAA_30
AAA_19
PRP38_assoc
T2SSE
SLFN-g3_helicase
nSTAND3
AAA_16
TsaE
Motif
Other DBs
NCBI-ProteinID:
EED80851
JGI:
97958
UniProt:
B8PE54
LinkDB
All DBs
AA seq
766 aa
AA seq
DB search
MADADLYNLEFLSLVAKITQEIDNHTGINDKTLAEFVISLHDESKTLPEFKQQLKGVGAN
FPESFVENVDRLILSMHPKHKKKSDSGKENVAAETESTLDEVDKQKRIFPGLALKDQDWQ
PSVTKDAIMKEVDDMMSQFEGAAKRARPKTPENDRSPKRQRRSRSRSPPPRRRSPSPRGR
SYGDRYDDRRGRNGDRARPLDERPVLFKIYNGRVNGMKEFGAFVQLEGVVGRVEGMVHVS
NIQQGARTNSAADLLTRGQSVKVKVMSVAGTRVGLSMKDVDQATGRDLTPHLRIKSEAEL
AEEDSKRSARGANAVPLNSRGNGKEEVVRSAKRLTSPERWEIKQLISSGAIDASEYPDLD
EDFANPMARAEVEEELDVEIREEEPPFLAGQTKKTLDLSPVKIVKAPDGSLNRAALAGAS
LAKERRELRQQEANEQADSEARDFSAPWLDPMSKESDRIFAQDLRGNIRGQKAGEQPKWK
EATFNKATTFGEITSLGIQEQRKSLPIFKLRDALLQAIGEHQVLIVVGDTGSGKTTQMTQ
YLAEAGFADKGKIGCTQPRRVAAMSVAKRVAEEVGCRLGQEVGYTIRFEDCTGPETRIKY
MTDGMLQRECLIDPDVSAYSVIMLDEAHERTIATDVLFGLLKRGQHETRREKAARGPTWY
GMAIETLHLVLGNGHRADELSDAVGSLKWFSIPCHSGRWPIEVGEVIYTSGRVSELSNPP
RNPFGRRRAGFKCPIGGARNGLCDHVTVLPLRTEDDGISRTGKERN
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgctgacctctacaacctcgaatttctgtctctcgtcgctaaaatcactcag
gaaatagacaaccatactggtattaacgacaagacactcgccgagttcgttatctcccta
catgatgaatcaaagacgttaccggagttcaagcagcagctaaagggcgtgggcgcaaac
tttcccgagtcgttcgtggagaatgtagatcgtctcatcttgagcatgcacccgaagcac
aagaaaaagtcagattcgggaaaggagaatgtcgcagcggagacggagagcactctcgac
gaagtagacaagcagaagcgtattttccccggtctcgctctcaaggaccaggactggcag
ccgagcgtcactaaagacgcaataatgaaggaagtggacgacatgatgtctcagtttgag
ggtgccgcgaagagggcgaggccaaaaactccggaaaacgatcgttcccccaagcgacaa
cgacggtctcgctcacgttctcctccaccacgacggcgcagtccgagtcctcgcgggaga
agctacggagacagatatgacgatcgtcgtgggaggaacggcgaccgtgcgcgccctctt
gacgagcggcccgtgctgttcaagatctacaatggccgggtcaatggtatgaaggagttt
ggtgccttcgtccagcttgagggtgttgtaggccgtgtggaaggcatggtccatgtatcg
aatattcagcaaggagcgcggactaactcggctgcggacttgctcacccgaggacagtcc
gtcaaggtgaaggtcatgagtgtggcggggactagggttggcctctccatgaaggatgta
gaccaagccactggccgagatcttacgcctcatctacgtatcaagtccgaggcagagctt
gcggaggaggattcaaaacggtctgctcgcggtgcaaacgctgttccgctcaactcgcgc
gggaatggaaaggaggaagtcgtgcgctcagcgaagcgtctgacctccccagagcggtgg
gagatcaaacagctcatctcgtctggcgctatcgatgcgtcagaataccctgaccttgac
gaggacttcgctaatcctatggcgcgcgccgaggttgaagaggagcttgacgtcgagatt
cgtgaggaggagccgcctttccttgcagggcagacgaagaagaccctcgacctcagccct
gtcaagatagtaaaggctcccgacggctcgctgaatcgtgccgctcttgcaggggcttcc
ctcgccaaagagcgaagggagttgcggcagcaagaagctaacgagcaagccgactccgaa
gcccgtgacttcagcgcgccttggcttgatcctatgtcgaaggagtcggatcgtattttt
gcacaggatcttcgggggaatattcgtggacagaaggccggagagcagccgaaatggaag
gaagccacgttcaacaaggcgactaccttcggtgagatcacgtctcttggcatccaggaa
cagcggaagagcttgccaattttcaagttgcgcgacgcattactccaagccataggggag
catcaagttcttatcgtcgtcggcgacactggctcgggtaagactacacaaatgacccag
tacctcgctgaggccggtttcgcggataagggcaagatcggctgcacacagcctcgacgt
gttgctgccatgtccgtcgcgaagcgtgtcgctgaagaggtcggttgtcgccttgggcag
gaggtcggatacacgatccgtttcgaggattgcacaggccccgagacgaggatcaagtac
atgacggatggtatgctccagcgagagtgcttgatcgaccccgatgtctctgcttactct
gtcatcatgctcgacgaggctcacgagcggactatcgctaccgacgttctatttggtttg
ttgaagaggggtcaacacgaaacacgcagagaaaaggcagctagggggccgacctggtat
gggatggcaatcgaaacattgcacctcgtgcttggtaacgggcatcgcgctgatgagctt
tcggacgccgtcggatccttgaaatggttttccattccatgtcatagcggacgatggccg
atagaagttggggaggttatctacacgagtggccgagtctcggagctttctaatcctcct
cgaaatccattcggcagacgtcgagccggtttcaaatgccccatcgggggcgctcgcaac
ggcctttgcgaccatgtcactgtgctcccgctgcgcacggaggatgacggaatttcgagg
acgggtaaagaacgaaattga
DBGET
integrated database retrieval system
