Planococcus plakortidis: BBI15_12205
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Entry
BBI15_12205 CDS
T04812
Name
(GenBank) RNA polymerase factor sigma-70
KO
K27000
RNA polymerase sigma-H factor
Organism
ppla
Planococcus plakortidis
Brite
KEGG Orthology (KO) [BR:
ppla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppla03021
]
BBI15_12205
Transcription machinery [BR:
ppla03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BBI15_12205
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
GerE
HTH_23
HTH_30
MSP1_C
HTH_38
Sigma70_r4
Sigma70_r3
Terminase_5
HTH_28
Motif
Other DBs
NCBI-ProteinID:
ANU20898
UniProt:
A0A1C7EAZ3
LinkDB
All DBs
Position
110086..110736
Genome browser
AA seq
216 aa
AA seq
DB search
MENFEQVRNRNFTEMADEELVGLVHSGNTEALDFLITKFRPFVRMKARSYFLIGADKEDI
IQEGMIGLYKAIRDFRSDKLSSFRAFAELCIVRQIITAIKTATRQKHIPLNSYVSLDKPI
YDEESDRTLMDVLAGSGADDPEELMIHNEEFRYMEGKMDEVLSELEREVLTLYLDGQSYQ
EISEKLERHVKSIDNALQRVKRKLERHLQASESRSS
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
gtggaaaattttgagcaagttcgcaaccgtaactttactgaaatggcagatgaagaactt
gtcggtctggtccatagcggcaatacggaagccttggattttctcatcaccaagttccgt
ccgtttgtgcggatgaaagcccgttcctattttctcattggcgcagataaggaagacatc
atccaggaaggaatgatcggcttgtataaagccattcgcgacttcaggagcgataaattg
tcttcattccgcgcattcgcggagctgtgcatcgtccgccagatcatcaccgcgatcaag
acagccacccgccaaaagcacataccgctaaattcctatgtctctcttgataagccaatt
tatgatgaagagtcggacaggacattgatggatgtactcgccggaagcggcgcggatgat
ccggaagagctgatgatccacaatgaagaattccgttatatggaaggcaaaatggatgaa
gtcctgagcgaactggaacgggaagtactgacgctgtatctcgatgggcagtcttatcag
gaaatctctgaaaagctggagcggcatgtaaaatcaatcgacaatgccctgcagcgggtc
aagcggaaacttgagcggcatttgcaggcgagtgaaagccggtcctcgtaa
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