Paenibacillus polymyxa SC2: PPSC2_00020
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Entry
PPSC2_00020 CDS
T01335
Symbol
recF
Name
(GenBank) recombinase RecF
KO
K03629
DNA replication and repair protein RecF
Organism
ppm
Paenibacillus polymyxa SC2
Pathway
ppm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PPSC2_00020 (recF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppm03400
]
PPSC2_00020 (recF)
DNA repair and recombination proteins [BR:
ppm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
PPSC2_00020 (recF)
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GFIT
Motif
Pfam:
SMC_N
AAA_15
AAA_23
AAA_21
AAA_29
SbcC_Walker_B
Motif
Other DBs
NCBI-ProteinID:
ADO53992
UniProt:
E3EDS6
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All DBs
Position
3011..4126
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AA seq
371 aa
AA seq
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MFVNNIVLQQYRNYEQLELNEFGPVNLLIGQNAQGKTNLVEAIFVLALTKSHRTSRDKEL
ISFGATSTHLAADVDKKYGKIRLDLSLSTQGKKAKINGLEQRKLSDFIGSLNVVMFAPED
LEIVKGTPGVRRRFLDMEIGQVAPGYLYHLQQYQKVLVQRNNLLKQAWGKDMASVQLMLE
VWNEQLVEHGVKIVKKRKQFITKLQKWAQAIHEGIAGGTEELKLTYVPSFGEPEEEDEAV
LLERFMIKLSQMREQEIRRGMTLAGPHRDDLAFAINGREVHTYGSQGQQRTTALSLKLAE
IELIHEEIGEYPILLLDDVLSELDPYRQTQLIETFQSKVQTFITATGIETLNAERLKGAH
IYHVHDGHVEH
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
gtgtttgtgaacaacattgttttgcagcagtaccggaactatgaacagctggagctgaat
gaattcgggcccgttaatttgctgatcggacaaaatgcgcaaggcaaaacgaatctggtt
gaggcgatttttgtattggctttaactaaaagtcaccgaacgtcccgcgacaaggaatta
atttctttcggggctacttccacccatctggctgccgatgtggataagaaatacgggaaa
atcagattggatctctcgttatccacacaaggcaaaaaagcaaagatcaacgggctagaa
cagcgaaagctgagcgattttatcggttcgttaaacgtggtcatgtttgcgcccgaggat
ctggaaattgtcaaaggaacaccgggggttcgccgccggtttcttgacatggaaattgga
caagttgcgccaggatatttgtatcatttgcagcaatatcagaaagtgctggttcagcgg
aataacctgctcaagcaagcttggggtaaagatatggcgtccgtgcagctgatgctggag
gtatggaatgagcaacttgttgagcatggtgttaaaattgtaaaaaagcggaaacaattt
ataacaaagctacaaaagtgggcccaggccattcatgaagggattgcaggtgggacagaa
gagttaaaattaacctatgttccctctttcggtgagccagaggaagaagatgaagctgtc
ttattggagcgatttatgataaagttatcccaaatgagggaacaggaaatccgccgtggc
atgactttggcgggaccccatcgtgatgatttggcctttgccattaacggcagagaagtg
catacgtatggctctcaggggcagcagcggacgacggccctgtctttgaagctggccgaa
atagaattaattcatgaggaaattggggagtatcctatcctgctgctggatgatgtattg
tccgagctggacccctatcgtcagactcagctgatcgagactttccaaagcaaggtacag
acctttatcacggcaaccgggattgagacgttgaacgcagaacgacttaagggtgcccat
atttatcacgtccacgacgggcatgtggaacactaa
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