Pandoraea pnomenusa DSM 16536: LV28_08350
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Entry
LV28_08350 CDS
T03411
Name
(GenBank) Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
ppnm
Pandoraea pnomenusa DSM 16536
Brite
KEGG Orthology (KO) [BR:
ppnm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppnm03000
]
LV28_08350
Transcription factors [BR:
ppnm03000
]
Prokaryotic type
Helix-turn-helix
Other families
LV28_08350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
AAA_5
AAA_2
HTH_23
HTH_28
IstB_IS21
DUF815
AAA_16
Mg_chelatase
DUF1488
AAA
HTH_29
AAA_3
HTH_30
nSTAND3
HTH_1
AAA_7
HTH_50
Motif
Other DBs
NCBI-ProteinID:
AIU26547
UniProt:
A0A856LS63
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All DBs
Position
complement(1314849..1315949)
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AA seq
366 aa
AA seq
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MRPDYLAIDDLSGTDARMRELLARGKRFVDRGIPVLILGETGTGKEFLARALHAYSERRA
QAFVAINTASLPEHLVESELFGYQRGAFSGALPGGMKGKLQQADGGTLFLDEIGDMPFAM
QTRLLRVLSEREVTPLGGSHPVPVDVQLICATHQDLASAVANGTFREDLYYRIAVGVLTL
PTLREREDKSELIARMLCDEWPGLRADQALARVSPQALSCLLTHAWPGNLRQMRAALRYA
CAVMSTNQLCVNDLPPELVGASRGTSAGSTPMAPATSSRVEIEASAMSREIPGGVHDRQA
RDARQGNESEVERERILQALAQHRWNISAAARTLGFCRASLYRKLKQLSIPHVRDCGDAL
NAAHFA
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgcgccccgactatctcgccatcgacgatctgagcggcaccgatgcccgcatgcgcgaa
ctgctcgcgcgcggcaagcgcttcgtcgatcgcggcatcccggtactgattctcggagag
acaggcaccggcaaggagtttctcgcccgcgcgctgcatgcctacagcgagcggcgcgcg
caggcattcgtcgccatcaatacggcgtcgttgccggagcatctcgtcgagagcgagttg
ttcggatatcagcgcggcgcattttccggcgcccttccgggcgggatgaagggcaagctg
caacaggccgacggcggcaccctctttctcgatgagatcggcgacatgccctttgcgatg
cagacgcgcctgctgcgggtgctgtccgagcgcgaggtcacgccgctgggcgggagccat
cccgtgcccgtcgacgtgcaactgatttgcgccacgcaccaggatctggccagcgccgta
gcgaacgggacattccgcgaagatctttattaccgcatcgcggtcggcgttctcacgctg
cccacgctgcgcgagcgcgaggataaatcggagctgatcgcgcgcatgctttgcgacgag
tggcccggactgcgcgccgatcaggcgctcgcccgcgtgtcaccgcaagcgctgtcttgt
ctgctcacccacgcatggccgggaaacctgcgccaaatgcgcgccgcgttgcgctacgca
tgtgccgtcatgagcacaaaccagttgtgtgtaaacgatctgccgccggaactcgttggg
gcgtcgcgcggcacgtcggcggggagtacaccgatggcgcccgcgacctcgtcgcgcgtc
gaaatcgaggcttcggcgatgtcgcgcgaaatacctggcggggtgcacgaccgtcaggcc
cgtgatgcgcgccagggaaacgagagcgaagtcgagcgggagcgcattctgcaggcgctc
gcgcaacatcgctggaatatttcggccgccgcgcgcacgctcgggttctgtcgtgcgtcg
ctatatcgaaagctcaagcagttgagcattccgcatgtgcgcgattgcggcgacgccctc
aatgcggctcacttcgcgtag
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